RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 LYNP07948 512 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 SAA4P35542 130 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 OPRL1P41146 370 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 CBX1P83916 185 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 C2orf68Q2NKX9 166 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 CD300LDQ6UXZ3 194 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 PRSS45Q7RTY3 260 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 TIGD4Q8IY51 512 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 ZSCAN4Q8NAM6 433 aaPredicted RBP13.26□□□□□ -0.29
COL18A1-205ENST00000423214 PAPD5Q8NDF8 572 aaKnown RBP13.26□□□□□ -0.29
COL18A1-205ENST00000423214 C8orf46Q8TAG6 207 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 FAM81AQ8TBF8 368 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 RPL3LQ92901 407 aaKnown RBP13.26□□□□□ -0.29
COL18A1-205ENST00000423214 MED30Q96HR3 178 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 AMELYQ99218 206 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 PKP2Q99959 881 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 OR51V1Q9H2C8 321 aa13.26□□□□□ -0.29
COL18A1-205ENST00000423214 SLC25A10Q9UBX3 287 aaPredicted RBP13.26□□□□□ -0.29
COL18A1-205ENST00000423214 A0A0G2JK05 382 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 TCRBV3S1A0A5B6 114 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 MEIOCA2RUB1 952 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 ZNF850A8MQ14 1090 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 AKR7A2O43488 359 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 TSPAN15O95858 294 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 NDUFB7P17568 137 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 DLX1P56177 255 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 BNIP1Q12981 228 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 BLMHQ13867 455 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 NCR3LG1Q68D85 454 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 ZDHHC23Q8IYP9 409 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 OR5R1Q8NH85 324 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 THEM6Q8WUY1 208 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 PIGCQ92535 297 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 GAFA1Q96PS6 74 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 RAB3IPQ96QF0 476 aaPredicted RBP13.25□□□□□ -0.29
COL18A1-205ENST00000423214 HIST1H2AAQ96QV6 131 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 WDR13Q9H1Z4 485 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 C16orf95Q9H693 158 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 ZNF319Q9P2F9 582 aa13.25□□□□□ -0.29
COL18A1-205ENST00000423214 PLXNB1O43157 2135 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 PRR23D1E9PI22 279 aaPredicted RBP13.24□□□□□ -0.29
COL18A1-205ENST00000423214 M0R1W7 72 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 SELENOFO60613 162 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 PRR23D2P0DMB1 279 aaPredicted RBP13.24□□□□□ -0.29
COL18A1-205ENST00000423214 ACKR3P25106 362 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 TGFBR2P37173 567 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 TGM4P49221 684 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 PSMA6P60900 246 aaKnown RBP13.24□□□□□ -0.29
COL18A1-205ENST00000423214 EGR3Q06889 387 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 GK3PQ14409 553 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 GINS1Q14691 196 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 ATPAF1Q5TC12 328 aaPredicted RBP13.24□□□□□ -0.29
COL18A1-205ENST00000423214 Q8N7P7 452 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 ZNF454Q8N9F8 522 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 OTOSQ8NHW6 89 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 OR5P3Q8WZ94 311 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 RNF170Q96K19 258 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 METTL8Q9H825 291 aaKnown RBP13.24□□□□□ -0.29
COL18A1-205ENST00000423214 NLKQ9UBE8 527 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 DNAJB9Q9UBS3 223 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 DSCAML1Q8TD84 2053 aa13.24□□□□□ -0.29
COL18A1-205ENST00000423214 ZNF816-ZNF321PA0A0X1KG74 233 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 ARRDC5A6NEK1 342 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 SIGLEC5O15389 551 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 CST4P01036 141 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 TFF1P04155 84 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 AMY2BP19961 511 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 GLRA1P23415 457 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 GABRA2P47869 451 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 UBE2E1P51965 193 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 CAV3P56539 151 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 ACSM1Q08AH1 577 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 TMEM236Q5W0B7 351 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 PLBD1Q6P4A8 553 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 ZNF788Q6ZQV5 615 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 COMMD2Q86X83 199 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 PNKDQ8N490 385 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 TMEM185AQ8NFB2 350 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 OR8B12Q8NGG6 310 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 FAM110DQ8TAY7 271 aaPredicted RBP13.23□□□□□ -0.29
COL18A1-205ENST00000423214 HPSE2Q8WWQ2 592 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 PPA2Q9H2U2 334 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 NIPAL2Q9H841 368 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 YY1AP1Q9H869 796 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 ZNF556Q9HAH1 456 aa13.23□□□□□ -0.29
COL18A1-205ENST00000423214 OR2AT4A6NND4 320 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 H0YAE9 185 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 PRODHO43272 600 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 TSPAN9O75954 239 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 OSMP13725 252 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 GPM6AP51674 278 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 RPS7P62081 194 aaKnown RBP13.22□□□□□ -0.29
COL18A1-205ENST00000423214 DGUOKQ16854 277 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 KRT77Q7Z794 578 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 C1QL4Q86Z23 238 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 ANGPTL6Q8NI99 470 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 LYZL4Q96KX0 146 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 ELL3Q9HB65 397 aaPredicted RBP13.22□□□□□ -0.29
COL18A1-205ENST00000423214 LRP12Q9Y561 859 aa13.22□□□□□ -0.29
COL18A1-205ENST00000423214 H3BUX3 64 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms