RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 WDR86Q86TI4 376 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 CELF2-AS1Q8N7Q2 184 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 OR13C3Q8NGS6 347 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 HPSE2Q8WWQ2 592 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 RGP1Q92546 391 aaPredicted RBP7.83□□□□□ -1.16
PDGFC-202ENST00000422544 SMIM19Q96E16 107 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 ADAT3Q96EY9 351 aaPredicted RBP7.83□□□□□ -1.16
PDGFC-202ENST00000422544 RNF170Q96K19 258 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 BPESC1Q9GZL8 116 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 GSX1Q9H4S2 264 aaPredicted RBP7.83□□□□□ -1.16
PDGFC-202ENST00000422544 CHODLQ9H9P2 273 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 ABCB9Q9NP78 766 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 TMEM106BQ9NUM4 274 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 C14orf119Q9NWQ9 140 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 DHDHQ9UQ10 334 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 PPP1R3CQ9UQK1 317 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 ZNF281Q9Y2X9 895 aa7.83□□□□□ -1.16
PDGFC-202ENST00000422544 ANKRD61A6NGH8 418 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 A6NLC8 198 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 ZNF732B4DXR9 585 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 RNF223E7ERA6 249 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 NDUFS8O00217 210 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 PLPP2O43688 288 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 MRPS14O60783 128 aaKnown RBP7.82□□□□□ -1.16
PDGFC-202ENST00000422544 PTBP3O95758 552 aaKnown RBP7.82□□□□□ -1.16
PDGFC-202ENST00000422544 CYB5R3P00387 301 aaPredicted RBP7.82□□□□□ -1.16
PDGFC-202ENST00000422544 SERPINA3P01011 423 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 RPSAP08865 295 aaKnown RBP7.82□□□□□ -1.16
PDGFC-202ENST00000422544 ZNF20P17024 532 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 GIFP27352 417 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 NR4A2P43354 598 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 GATA4P43694 442 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 GPR6P46095 362 aaPredicted RBP7.82□□□□□ -1.16
PDGFC-202ENST00000422544 SOX2P48431 317 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 GPM6AP51674 278 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 CHN2P52757 468 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 EMX1Q04741 257 aaPredicted RBP7.82□□□□□ -1.16
PDGFC-202ENST00000422544 ACSM1Q08AH1 577 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 UBE2V2Q15819 145 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 AVPI1Q5T686 147 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 ZNF826PQ6ZT77 177 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 C11orf53Q8IXP5 236 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 SPARTQ8N0X7 666 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 CIARTQ8N365 385 aaPredicted RBP7.82□□□□□ -1.16
PDGFC-202ENST00000422544 OR1M1Q8NGA1 313 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 OR5A2Q8NGI9 324 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 OR13C5Q8NGS8 318 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 GPR148Q8TDV2 347 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 TSEN15Q8WW01 171 aaKnown RBP7.82□□□□□ -1.16
PDGFC-202ENST00000422544 C10orf35Q96D05 121 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 PGLYRP3Q96LB9 341 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 PIMREGQ9BSJ6 248 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 RTL8AQ9BWD3 113 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 REG4Q9BYZ8 158 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 FN3KRPQ9HA64 309 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 ACOT13Q9NPJ3 140 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 C1orf123Q9NWV4 160 aa7.82□□□□□ -1.16
PDGFC-202ENST00000422544 VWC2LB2RUY7 222 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 CLDN25C9JDP6 229 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 TMEM178BH3BS89 294 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 H7C1Q1 480 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 CDIPTO14735 213 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 WNT9BO14905 357 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 ZNF205O95201 554 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 OCM2P0CE71 109 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 SLC25A16P16260 332 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 RPS11P62280 158 aaKnown RBP eCLIP7.81□□□□□ -1.16
PDGFC-202ENST00000422544 GNG3P63215 75 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 HOXA4Q00056 320 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-202ENST00000422544 BDH1Q02338 343 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 ZNF154Q13106 437 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 TBCEQ15813 527 aaPredicted RBP7.81□□□□□ -1.16
PDGFC-202ENST00000422544 KCTD21Q4G0X4 260 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 FAM76BQ5HYJ3 339 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 FAM201AQ5SY85 155 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 ZNF773Q6PK81 442 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 SVOPQ8N4V2 548 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 BOLLQ8N9W6 283 aaKnown RBP7.81□□□□□ -1.16
PDGFC-202ENST00000422544 MAPK1IP1LQ8NDC0 245 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 OR11L1Q8NGX0 322 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 TRMT10AQ8TBZ6 339 aaKnown RBP7.81□□□□□ -1.16
PDGFC-202ENST00000422544 Q8TCH9 128 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 NPRL2Q8WTW4 380 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 PP6455Q8WZ26 134 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 RPL3LQ92901 407 aaKnown RBP7.81□□□□□ -1.16
PDGFC-202ENST00000422544 RAB1CQ92928 201 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 ERGIC1Q969X5 290 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 MGLLQ99685 303 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 MDFIQ99750 246 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 CHST5Q9GZS9 411 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 OR51I2Q9H344 312 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 SLC7A11Q9UPY5 501 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 LRCH1Q9Y2L9 728 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 WIPI2Q9Y4P8 454 aa7.81□□□□□ -1.16
PDGFC-202ENST00000422544 IGHV4-61A0A0C4DH41 118 aa7.8□□□□□ -1.16
PDGFC-202ENST00000422544 IGKV1-9A0A0C4DH69 117 aa7.8□□□□□ -1.16
PDGFC-202ENST00000422544 TRBV5-5A0A0J9YX44 114 aa7.8□□□□□ -1.16
PDGFC-202ENST00000422544 FAM230AA0A1W2PPH8 454 aa7.8□□□□□ -1.16
PDGFC-202ENST00000422544 A0A1W2PPK0 400 aa7.8□□□□□ -1.16
PDGFC-202ENST00000422544 hCG_1807616A0A1W2PRN6 198 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms