RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 IL1AP01583 271 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 IGHV1-46P01743 117 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 RAB3AP20336 220 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 AZGP1P25311 298 aaKnown RBP11.28□□□□□ -0.6
CNN3-203ENST00000415017 SSTR2P30874 369 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 THBS2P35442 1172 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 GNALP38405 381 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 GATA4P43694 442 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 ZNF81P51508 661 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 FUT6P51993 359 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 VBP1P61758 197 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 CNN3Q15417 329 aaKnown RBP11.28□□□□□ -0.6
CNN3-203ENST00000415017 FAM209AQ5JX71 171 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 C1orf100Q5SVJ3 147 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 C20orf204Q6ZNR8 217 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 RNF144BQ7Z419 303 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 WDR86Q86TI4 376 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 C11orf53Q8IXP5 236 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 C12orf43Q96C57 262 aaKnown RBP11.28□□□□□ -0.6
CNN3-203ENST00000415017 DGCR14Q96DF8 476 aaKnown RBP11.28□□□□□ -0.6
CNN3-203ENST00000415017 PAPOLGQ9BWT3 736 aaKnown RBP11.28□□□□□ -0.6
CNN3-203ENST00000415017 EXOSC4Q9NPD3 245 aaKnown RBP11.28□□□□□ -0.6
CNN3-203ENST00000415017 CKLFQ9UBR5 152 aa11.28□□□□□ -0.6
CNN3-203ENST00000415017 A0A1W2PPW3 197 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 PLSCR5A0PG75 271 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 H7C417 338 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 M0R233 179 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 ACAA1P09110 424 aaPredicted RBP11.27□□□□□ -0.61
CNN3-203ENST00000415017 PRKACBP22694 351 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 MPZP25189 248 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 BDKRB2P30411 391 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 SDC2P34741 201 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 RPS19P39019 145 aaKnown RBP11.27□□□□□ -0.61
CNN3-203ENST00000415017 ALDH3B1P43353 468 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 ASCL4Q6XD76 172 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 MOB3CQ70IA8 216 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 NKAIN3Q8N8D7 197 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 OR52N4Q8NGI2 321 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 ADAT1Q9BUB4 502 aaKnown RBP11.27□□□□□ -0.61
CNN3-203ENST00000415017 FAM192AQ9GZU8 254 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 OR51I2Q9H344 312 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 TCF7L1Q9HCS4 588 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 IL19Q9UHD0 177 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 PDZD2O15018 2839 aa11.27□□□□□ -0.61
CNN3-203ENST00000415017 TMEM210A6NLX4 147 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 ANXA2P2A6NMY6 339 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 TMEM127O75204 238 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 ERCC1P07992 297 aaPredicted RBP11.26□□□□□ -0.61
CNN3-203ENST00000415017 NAT2P11245 290 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 PAX1P15863 534 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 CFHR2P36980 270 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 ZP1P60852 638 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 LSM3P62310 102 aaKnown RBP11.26□□□□□ -0.61
CNN3-203ENST00000415017 GNG3P63215 75 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 RIN1Q13671 783 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 SPCS2Q15005 226 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 OR8G1Q15617 311 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 KISS1Q15726 138 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 NKPD1Q17RQ9 610 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 PCGF3Q3KNV8 242 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 SPRNQ5BIV9 151 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 PLCXD3Q63HM9 321 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 LHFPL2Q6ZUX7 228 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 USP43Q70EL4 1123 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 DVL3Q92997 716 aaPredicted RBP11.26□□□□□ -0.61
CNN3-203ENST00000415017 SLC25A28Q96A46 364 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 UQCC2Q9BRT2 126 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 RTL8AQ9BWD3 113 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 CXXC4Q9H2H0 198 aa11.26□□□□□ -0.61
CNN3-203ENST00000415017 METTL17Q9H7H0 456 aaPredicted RBP11.26□□□□□ -0.61
CNN3-203ENST00000415017 RSL24D1Q9UHA3 163 aaKnown RBP11.26□□□□□ -0.61
CNN3-203ENST00000415017 LRP5LA4QPB2 252 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 F5H5P2 479 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 PDCD5O14737 125 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 MAS1P04201 325 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 CLEC2LP0C7M8 214 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 RAB3BP20337 219 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 MYL9P24844 172 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 RBP2P50120 134 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 PSMD7P51665 324 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 SNRPD2P62316 118 aaKnown RBP11.25□□□□□ -0.61
CNN3-203ENST00000415017 PPP3R1P63098 170 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 ZNF154Q13106 437 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 DMRTC1Q5HYR2 192 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 CALHM1Q8IU99 346 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 Q8NFD4 153 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 OR10AD1Q8NGE0 317 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 NDNFQ8TB73 568 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 DYNC2LI1Q8TCX1 351 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 SLC25A46Q96AG3 418 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 FOXRED1Q96CU9 486 aaPredicted RBP11.25□□□□□ -0.61
CNN3-203ENST00000415017 ELMOD3Q96FG2 381 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 RNF170Q96K19 258 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 MEGF10Q96KG7 1140 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 C1orf147Q96MC9 270 aaPredicted RBP11.25□□□□□ -0.61
CNN3-203ENST00000415017 MICU1Q9BPX6 476 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 PKIBQ9C010 78 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 SLITRK2Q9H156 845 aa11.25□□□□□ -0.61
CNN3-203ENST00000415017 UBTD1Q9HAC8 227 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms