RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 NEK6Q9HC98 313 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 TMEM138Q9NPI0 162 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 SNTG1Q9NSN8 517 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 LAMP3Q9UQV4 416 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 PMF1-BGLAPU3KQ54 211 aa17.4■□□□□ 0.38
VSX1-203ENST00000409285 A6NHS1 94 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 OVOL3O00110 214 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 PRKACBP22694 351 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 AZGP1P25311 298 aaKnown RBP17.39■□□□□ 0.37
VSX1-203ENST00000409285 FUT6P51993 359 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 CEP78Q5JTW2 689 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 CLVS1Q8IUQ0 354 aaPredicted RBP17.39■□□□□ 0.37
VSX1-203ENST00000409285 CDH26Q8IXH8 852 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 OR51A2Q8NGJ7 313 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 HIST1H2AAQ96QV6 131 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 MICU1Q9BPX6 476 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 RTL8AQ9BWD3 113 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 FGF23Q9GZV9 251 aaPredicted RBP17.39■□□□□ 0.37
VSX1-203ENST00000409285 SLITRK2Q9H156 845 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 CXXC4Q9H2H0 198 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 TCF7L1Q9HCS4 588 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 IL19Q9UHD0 177 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 SLC7A11Q9UPY5 501 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 NOTCH2Q04721 2471 aa17.39■□□□□ 0.37
VSX1-203ENST00000409285 SMIM31A0A1B0GVY4 71 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 PQLC2LA1A4F0 135 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 MEGF11A6BM72 1044 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 TMEM210A6NLX4 147 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 H0YL77 283 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 PRF1P14222 555 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 TNFSF4P23510 183 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 MYL9P24844 172 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 GATA4P43694 442 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 MTNR1BP49286 362 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 GNG3P63215 75 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 MOB3CQ70IA8 216 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 LRRTM1Q86UE6 522 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 DVL3Q92997 716 aaPredicted RBP17.38■□□□□ 0.37
VSX1-203ENST00000409285 CPNE2Q96FN4 548 aaPredicted RBP17.38■□□□□ 0.37
VSX1-203ENST00000409285 NAA50Q9GZZ1 169 aaKnown RBP17.38■□□□□ 0.37
VSX1-203ENST00000409285 C14orf119Q9NWQ9 140 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 CEPT1Q9Y6K0 416 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 POLQO75417 2590 aa17.38■□□□□ 0.37
VSX1-203ENST00000409285 ZNF701M0R085 212 aaPredicted RBP17.37■□□□□ 0.37
VSX1-203ENST00000409285 CD37P11049 281 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 BDKRB2P30411 391 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 MAB21L1Q13394 359 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 TESK1Q15569 626 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 LHFPL2Q6ZUX7 228 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 TPRA1Q86W33 373 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 CACNG6Q9BXT2 260 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 TLNRD1Q9H1K6 362 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 NDUFA13Q9P0J0 144 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 USF3Q68DE3 2245 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 SHISA3A0PJX4 238 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 CCDC160A6NGH7 325 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 F5H5P2 479 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 SPRY3O43610 288 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 ADRA2CP18825 462 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 THBS2P35442 1172 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 SRP9P49458 86 aaKnown RBP17.37■□□□□ 0.37
VSX1-203ENST00000409285 RBP2P50120 134 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 LYPD6Q86Y78 171 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 RNF170Q96K19 258 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 OR2V2Q96R30 315 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 CCL19Q99731 98 aa17.37■□□□□ 0.37
VSX1-203ENST00000409285 LOC100289279A0A1B0GTE1 492 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 MAGEB3O15480 346 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 OCMP0CE72 109 aaPredicted RBP17.36■□□□□ 0.37
VSX1-203ENST00000409285 GPM6AP51674 278 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 TNFAIP6P98066 277 aaPredicted RBP17.36■□□□□ 0.37
VSX1-203ENST00000409285 CRIP3Q6Q6R5 217 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 WDR86Q86TI4 376 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 OR52N4Q8NGI2 321 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 ERGIC1Q969X5 290 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 ISOC1Q96CN7 298 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 BORCS8Q96FH0 119 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 MEGF10Q96KG7 1140 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 EGLN1Q9GZT9 426 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 FAM192AQ9GZU8 254 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 RAB1BQ9H0U4 201 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 RNF167Q9H6Y7 350 aa17.36■□□□□ 0.37
VSX1-203ENST00000409285 METTL17Q9H7H0 456 aaPredicted RBP17.36■□□□□ 0.37
VSX1-203ENST00000409285 ARID1AO14497 2285 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 LRP5LA4QPB2 252 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 ZNF732B4DXR9 585 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 SLC22A1O15245 554 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 MAS1P04201 325 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 HCKP08631 526 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 PAX1P15863 534 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 TNFRSF1AP19438 455 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 CFPP27918 469 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 PSMD7P51665 324 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 NCS1P62166 190 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 KISS1Q15726 138 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 DDI2Q5TDH0 399 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 ZNF573Q86YE8 665 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 ZCCHC24Q8N2G6 241 aaKnown RBP17.35■□□□□ 0.37
VSX1-203ENST00000409285 OR51I2Q9H344 312 aa17.35■□□□□ 0.37
VSX1-203ENST00000409285 CXorf56Q9H5V9 222 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms