RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 MR1Q95460 341 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 ZNF587Q96SQ5 575 aaPredicted RBP4.46□□□□□ -1.69
SSR1-202ENST00000397511 PRODH2Q9UF12 536 aa4.46□□□□□ -1.69
SSR1-202ENST00000397511 FER1L5A0AVI2 2057 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 IGKV1D-43A0A0B4J1Z2 117 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 A0A1W2PPC1 479 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 TMEM235A6NFC5 223 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 ZNF724A8MTY0 619 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 GDF9O60383 454 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 ZNF354AO60765 605 aaPredicted RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 ALOX12BO75342 701 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 CTAG2O75638 210 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 TSPAN15O95858 294 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 SERPINA5P05154 406 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 PNMTP11086 282 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 CD38P28907 300 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 SERPINF1P36955 418 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 SULT1A2P50226 295 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 FBXW4P57775 412 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 SKP1P63208 163 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 CYCSP99999 105 aaKnown RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 INSM1Q01101 510 aaPredicted RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 ELOCQ15369 112 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 UBE2V2Q15819 145 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 ZNF684Q5T5D7 378 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 CARD17Q5XLA6 110 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 GGNBP1Q5YKI7 109 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 ASPHD2Q6ICH7 369 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 LYG2Q86SG7 212 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 COMMD2Q86X83 199 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 CDC20BQ86Y33 519 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 FOXRED2Q8IWF2 684 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HSD17B11Q8NBQ5 300 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 CLEC1AQ8NC01 280 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 CHST4Q8NCG5 386 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 FAM3DQ96BQ1 224 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 SLC25A44Q96H78 314 aaPredicted RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 TMEM208Q9BTX3 173 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 FOXQ1Q9C009 403 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 RAB33BQ9H082 229 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 FSCN3Q9NQT6 498 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 PLSCR4Q9NRQ2 329 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 MRPL22Q9NWU5 206 aaKnown RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 OR14J1Q9UGF5 321 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 STEAP1Q9UHE8 339 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 DHDHQ9UQ10 334 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HDGFL3Q9Y3E1 203 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 RALGAPA1Q6GYQ0 2036 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 A0A087WZY1 265 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 CCDC187A0A096LP49 1063 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 TRBV6-7A0A0A0MS04 114 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 C13orf42A0A1B0GVH6 325 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 SHISA7A6NL88 538 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 P2RY10O00398 339 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 DVL1O14640 695 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 SOX15O60248 233 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HIST1H2BKO60814 126 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 ABHD16AO95870 558 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HIST1H2BJP06899 126 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 SFTPBP07988 381 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 RAB6AP20340 208 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HIST1H2BOP23527 126 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HIST1H2BBP33778 126 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 PPICP45877 212 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 SCAND1P57086 179 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HIST1H2BDP58876 126 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 RPS23P62266 143 aaKnown RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 HIST1H2BCP62807 126 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 POU3F1Q03052 451 aaPredicted RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 SMAD4Q13485 552 aaKnown RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 ODF1Q14990 250 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HIST2H2BEQ16778 126 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 Q6ZRG5 221 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 KCTD9Q7L273 389 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 RNF144BQ7Z419 303 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 DCXRQ7Z4W1 244 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 GVQW1Q8N7I0 195 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 LRRC75AQ8NAA5 344 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 OR1L3Q8NH93 324 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 OTOSQ8NHW6 89 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HIST1H2BHQ93079 126 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 C8orf44Q96CB5 159 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 MVB12AQ96EY5 273 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HIST1H2BNQ99877 126 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 HIST1H2BMQ99879 126 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 ABHD6Q9BV23 337 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 EIF5A2Q9GZV4 153 aaKnown RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 TAF9BQ9HBM6 251 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 KCNJ16Q9NPI9 418 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 LANCL2Q9NS86 450 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 DNAJB11Q9UBS4 358 aa4.46□□□□□ -1.7
SSR1-202ENST00000397511 MRPS18BQ9Y676 258 aaKnown RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 DSPP15924 2871 aaKnown RBP4.46□□□□□ -1.7
SSR1-202ENST00000397511 MYO7BQ6PIF6 2116 aa4.45□□□□□ -1.7
SSR1-202ENST00000397511 TMED7-TICAM2A0A0A6YYA0 188 aa4.45□□□□□ -1.7
SSR1-202ENST00000397511 PRSS37A4D1T9 235 aa4.45□□□□□ -1.7
SSR1-202ENST00000397511 C9J4A7 227 aa4.45□□□□□ -1.7
SSR1-202ENST00000397511 QDPRP09417 244 aa4.45□□□□□ -1.7
SSR1-202ENST00000397511 OR8U9P0C7N5 309 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms