RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ABLIM2Q6H8Q1 611 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 SLC35D2Q76EJ3 337 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 CSNK2A3Q8NEV1 391 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 RASD2Q96D21 266 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 MISP3Q96FF7 219 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 C14orf144Q96I85 54 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 CMTM3Q96MX0 182 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 MOGAT1Q96PD6 335 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 ZNF426Q9BUY5 554 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 PARD6AQ9NPB6 346 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 RCC2Q9P258 522 aaKnown RBP5.08□□□□□ -1.6
RFFL-202ENST00000394597 MYOTQ9UBF9 498 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 OR14J1Q9UGF5 321 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 FOXJ3Q9UPW0 622 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 CARHSP1Q9Y2V2 147 aaKnown RBP5.08□□□□□ -1.6
RFFL-202ENST00000394597 SF3B6Q9Y3B4 125 aaKnown RBP5.08□□□□□ -1.6
RFFL-202ENST00000394597 KLRC4-KLRK1H3BQV0 150 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 H7C1C5 153 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 XRCC3O43542 346 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 ACTL6AO96019 429 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 IGHV2-70P01814 119 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 CT45A8P0DMV1 189 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 CT45A9P0DMV2 189 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 HIST1H1CP16403 213 aaKnown RBP5.08□□□□□ -1.6
RFFL-202ENST00000394597 CX3CR1P49238 355 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 RPL27P61353 136 aaKnown RBP5.08□□□□□ -1.6
RFFL-202ENST00000394597 LCN6P62502 163 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 PMS2P11Q13670 270 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 CEBPEQ15744 281 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 TAF9Q16594 264 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 CLEC12BQ2HXU8 276 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 CT45A2Q5DJT8 189 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 TMEM182Q6ZP80 229 aaPredicted RBP5.08□□□□□ -1.6
RFFL-202ENST00000394597 DGAT2L6Q6ZPD8 337 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 OR5AP2Q8NGF4 316 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 PGAM5Q96HS1 289 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 MRGPRX4Q96LA9 322 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 AICDAQ9GZX7 198 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 PIPOXQ9P0Z9 390 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 POMT1Q9Y6A1 747 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 PRSS47A8MTI9 375 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 B4E171 279 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 DVL2O14641 736 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 GLSO94925 669 aaPredicted RBP5.08□□□□□ -1.6
RFFL-202ENST00000394597 HCKP08631 526 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 S100GP29377 79 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 TSPAN7P41732 249 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 NPY4RP50391 375 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 BIDP55957 195 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 CARD18P57730 90 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 ADIRFQ15847 76 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 SAPCD1Q5SSQ6 148 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 TMEM244Q5VVB8 128 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 CD200R1LQ6Q8B3 271 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 TOMM20LQ6UXN7 152 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 ZNF66Q6ZN08 573 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 OR13C3Q8NGS6 347 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 OR2Y1Q8NGV0 311 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 OR4K15Q8NH41 348 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 FLVCR1-AS1Q8TAF5 88 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 TOMM40LQ969M1 308 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 TVP23CQ96ET8 276 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 PIK3IP1Q96FE7 263 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 ZNF346Q9UL40 294 aaKnown RBP5.08□□□□□ -1.6
RFFL-202ENST00000394597 NEUROG3Q9Y4Z2 214 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 B3GALT1Q9Y5Z6 326 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 NPTNQ9Y639 398 aa5.08□□□□□ -1.6
RFFL-202ENST00000394597 MYLKQ15746 1914 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 A0A0U1RQK1 487 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 A0A1W2PQM1 296 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 SHISA3A0PJX4 238 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 OR2M5A3KFT3 312 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 GEMIN2O14893 280 aaKnown RBP5.07□□□□□ -1.6
RFFL-202ENST00000394597 KCNAB3O43448 404 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ITGA5P08648 1049 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 CCNOP22674 350 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 OMGP23515 440 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 BTCP35070 178 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 CCL11P51671 97 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ZNF117Q03924 483 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 RPL18Q07020 188 aaKnown RBP5.07□□□□□ -1.6
RFFL-202ENST00000394597 SPOCK1Q08629 439 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 RPL7L1Q6DKI1 246 aaKnown RBP5.07□□□□□ -1.6
RFFL-202ENST00000394597 NPSR1Q6W5P4 371 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ZAR1Q86SH2 424 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 LRP11Q86VZ4 500 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ZNF321PQ8N8H1 164 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ZNF511Q8NB15 262 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 NECAP1Q8NC96 275 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 DEFB124Q8NES8 71 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 TMEM37Q8WXS4 190 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 FOXN4Q96NZ1 517 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ST6GALNAC5Q9BVH7 336 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 CHST6Q9GZX3 395 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 CHST11Q9NPF2 352 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 CBLN4Q9NTU7 201 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 ZDHHC8Q9ULC8 765 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 LAMP3Q9UQV4 416 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 LOC100289279A0A1B0GTE1 492 aa5.07□□□□□ -1.6
RFFL-202ENST00000394597 XKRY2A2RUG3 117 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms