RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 MYLPFQ96A32 169 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 PTH2Q96A98 100 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 ISOC2Q96AB3 205 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 RPEQ96AT9 228 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 EXOSC8Q96B26 276 aaKnown RBP1.42□□□□□ -2.18
TRAV40-201ENST00000390467 YIPF6Q96EC8 236 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 WDR34Q96EX3 536 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 PAGE5Q96GU1 130 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 CCDC42Q96M95 316 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 ZNF75AQ96N20 296 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 ZFP3Q96NJ6 502 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 XPO6Q96QU8 1125 aaKnown RBP1.42□□□□□ -2.18
TRAV40-201ENST00000390467 EBNA1BP2Q99848 306 aaKnown RBP1.42□□□□□ -2.18
TRAV40-201ENST00000390467 DCUN1D5Q9BTE7 237 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 BEX2Q9BXY8 128 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 KRTAP4-1Q9BYQ7 146 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 SYT4Q9H2B2 425 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 NMRAL1Q9HBL8 299 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 NOX3Q9HBY0 568 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 MYOZ1Q9NP98 299 aaPredicted RBP1.42□□□□□ -2.18
TRAV40-201ENST00000390467 XPNPEP1Q9NQW7 623 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 GID8Q9NWU2 228 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 C1orf109Q9NX04 203 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 OR12D3Q9UGF7 316 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 PCYOX1Q9UHG3 505 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 SMPXQ9UHP9 88 aa1.42□□□□□ -2.18
TRAV40-201ENST00000390467 POLR3HQ9Y535 204 aaPredicted RBP1.42□□□□□ -2.18
TRAV40-201ENST00000390467 EIF3AQ14152 1382 aaKnown RBP1.42□□□□□ -2.18
TRAV40-201ENST00000390467 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
TRAV40-201ENST00000390467 OTOGLQ3ZCN5 2332 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 ADGRA3Q8IWK6 1321 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 USP42Q9H9J4 1324 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 YEATS2Q9ULM3 1422 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 NSG1A0A0A6YYJ2 146 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 A0A1B0GVI7 797 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 A0A1W2PRF3 423 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 A0A1W2PRM7 423 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 RBMY1BA6NDE4 496 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 RBMY1EA6NEQ0 496 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 ZNF98A6NK75 572 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 SYCE1LA8MT33 242 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 H0Y980 276 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 hCG_2039718K7EN88 272 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 M0R036 132 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 SIRPB1O00241 398 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 CCRL2O00421 344 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 PLPP3O14495 311 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 FGF16O43320 207 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 CXCL13O43927 109 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 FADS1O60427 444 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 DPM1O60762 260 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 TOM1O60784 492 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 NOS1APO75052 506 aaPredicted RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 GATBO75879 557 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 SRP72O76094 671 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 MPZL1O95297 269 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 TNFAIP8O95379 198 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 PLEKHA8P1O95397 391 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 CRYZL1O95825 349 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 SERPINA1P01009 418 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 ORM1P02763 201 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 H2BFMP0C1H6 154 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 RBMY1DP0C7P1 496 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 RBMY1A1P0DJD3 496 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 THRAP10827 490 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 MYL2P10916 166 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 ZNF35P13682 527 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 MPIP34949 423 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 RPL13AP40429 203 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 NBL1P41271 181 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 NSG1P42857 185 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 SLC1A1P43005 524 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 GPR1P46091 355 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 QARSP47897 775 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 GABRA4P48169 554 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 RFX3P48380 749 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 CYB561P49447 251 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 PRLHRP49683 370 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 TAS2R60P59551 318 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 UBE2MP61081 183 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 UBE2KP61086 200 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 RPS15AP62244 130 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 RBX1P62877 108 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 FLI1Q01543 452 aaPredicted RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 TNFRSF9Q07011 255 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 C2orf80Q0P641 193 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 VGLL4Q14135 290 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 FLOT2Q14254 428 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 SMCO1Q147U7 214 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 TAF1AQ15573 450 aaPredicted RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 ZNHIT3Q15649 155 aaPredicted RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 GABRA6Q16445 453 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 RPEL1Q2QD12 228 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 GCSAMLQ5JQS6 135 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 RBM48Q5RL73 367 aaKnown RBP1.41□□□□□ -2.18
TRAV40-201ENST00000390467 C1orf220Q5T0J3 134 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 IDNKQ5T6J7 187 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 SDHAF4Q5VUM1 108 aa1.41□□□□□ -2.18
TRAV40-201ENST00000390467 HACD4Q5VWC8 232 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms