RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 DRAM2Q6UX65 266 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 TMEM17Q86X19 198 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 BVESQ8NE79 360 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 TMEM230Q96A57 120 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 LINC00052Q96N35 136 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 PECRQ9BY49 303 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 WDR13Q9H1Z4 485 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 ZNF175Q9Y473 711 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 COL27A1Q8IZC6 1860 aaPredicted RBP13.09□□□□□ -0.31
SCFD2-201ENST00000388940 PCP4L1A6NKN8 68 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 PDGFBP01127 241 aaPredicted RBP13.09□□□□□ -0.31
SCFD2-201ENST00000388940 P04436 131 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 CRHP06850 196 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 CST2P09228 141 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 FCGR2AP12318 317 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 AMY2BP19961 511 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 NUP62P37198 522 aaPredicted RBP13.09□□□□□ -0.31
SCFD2-201ENST00000388940 RAB35Q15286 201 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 TRIM61Q5EBN2 209 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 H3F3CQ6NXT2 135 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 KCTD9Q7L273 389 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 PPP1R32Q7Z5V6 425 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 DTX1Q86Y01 620 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 GPR137CQ8N3F9 429 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 SGK3Q96BR1 496 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 DNTTIP1Q9H147 329 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 OSGIN2Q9Y236 505 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 MRPS18CQ9Y3D5 142 aaKnown RBP13.09□□□□□ -0.31
SCFD2-201ENST00000388940 VCANP13611 3396 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 MYO7BQ6PIF6 2116 aa13.09□□□□□ -0.31
SCFD2-201ENST00000388940 TRBV6-7A0A0A0MS04 114 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 CPT2P23786 658 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 PSMB6P28072 239 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 BLVRBP30043 206 aaPredicted RBP13.08□□□□□ -0.32
SCFD2-201ENST00000388940 LRRC37A5PQ49AS3 106 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 PXT1Q8NFP0 134 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 RHBDD1Q8TEB9 315 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 ZNF837Q96EG3 531 aaPredicted RBP13.08□□□□□ -0.32
SCFD2-201ENST00000388940 S100A13Q99584 98 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 CDC6Q99741 560 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 C1QTNF6Q9BXI9 259 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 SYNGR3O43761 229 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 DBHP09172 617 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 SERPINF1P36955 418 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 NPY4RP50391 375 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 CARD18P57730 90 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 MOB3CQ70IA8 216 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 Q7L0L9 218 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 GGNQ86UU5 652 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 SULF2Q8IWU5 870 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 OR5D18Q8NGL1 313 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 CPT1CQ8TCG5 803 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 RTBDNQ9BSG5 229 aaPredicted RBP13.08□□□□□ -0.32
SCFD2-201ENST00000388940 RAB18Q9NP72 206 aa13.08□□□□□ -0.32
SCFD2-201ENST00000388940 NCKAP5O14513 1909 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 ZNF716A6NP11 495 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 TSPAN4O14817 238 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 SGCEO43556 437 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 ACP1P24666 158 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 OR3A2P47893 321 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 SNU13P55769 128 aaKnown RBP13.07□□□□□ -0.32
SCFD2-201ENST00000388940 Q0VFX4 171 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 SURF2Q15527 256 aaPredicted RBP13.07□□□□□ -0.32
SCFD2-201ENST00000388940 KRTAP27-1Q3LI81 207 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 AADACL3Q5VUY0 350 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 INO80EQ8NBZ0 244 aaPredicted RBP13.07□□□□□ -0.32
SCFD2-201ENST00000388940 SEMA6DQ8NFY4 1073 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 OR5AP2Q8NGF4 316 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 OR13G1Q8NGZ3 307 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 NPRL2Q8WTW4 380 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 SPSB1Q96BD6 273 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 NECAB3Q96P71 396 aaPredicted RBP13.07□□□□□ -0.32
SCFD2-201ENST00000388940 SHARPINQ9H0F6 387 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 CHMP1AQ9HD42 196 aaPredicted RBP13.07□□□□□ -0.32
SCFD2-201ENST00000388940 TMEM38BQ9NVV0 291 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 TCFL5Q9UL49 500 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 PADI1Q9ULC6 663 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 SPEGQ15772 3267 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 C5orf51A6NDU8 294 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 EEF1E1-BLOC1S5C9J1V9 151 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 MASP2O00187 686 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 HPNP05981 417 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 HOXD4P09016 255 aaPredicted RBP13.07□□□□□ -0.32
SCFD2-201ENST00000388940 SERPINA2P20848 420 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 TUSC1Q2TAM9 212 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 SNAI3Q3KNW1 292 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 DCAF12Q5T6F0 453 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 CLEC18BQ6UXF7 455 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 CSNK2A3Q8NEV1 391 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 OR14L1PQ8NHC6 308 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 ADGRG7Q96K78 797 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 ST6GALNAC5Q9BVH7 336 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 MBD2Q9UBB5 411 aa13.07□□□□□ -0.32
SCFD2-201ENST00000388940 MYO15AQ9UKN7 3530 aa13.06□□□□□ -0.32
SCFD2-201ENST00000388940 STARP49675 285 aa13.06□□□□□ -0.32
SCFD2-201ENST00000388940 LUMP51884 338 aaPredicted RBP13.06□□□□□ -0.32
SCFD2-201ENST00000388940 SCRN3Q0VDG4 424 aa13.06□□□□□ -0.32
SCFD2-201ENST00000388940 ABLIM2Q6H8Q1 611 aa13.06□□□□□ -0.32
SCFD2-201ENST00000388940 YRDCQ86U90 279 aaKnown RBP13.06□□□□□ -0.32
SCFD2-201ENST00000388940 RELL2Q8NC24 303 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms