RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 TRBV12-3P01733 135 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 TRBC1P01850 177 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 MT-ND3P03897 115 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 DBTP11182 482 aaKnown RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 MLNP12872 115 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 KRT13P13646 458 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 CPMP14384 443 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ATP1B2P14415 290 aaPredicted RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 CTLA4P16410 223 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 GAP43P17677 238 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 SLC6A1P30531 599 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 GNRHRP30968 328 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 CCR7P32248 378 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 FOXN2P32314 431 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 GABRA4P48169 554 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 RAB7AP51149 207 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ACLYP53396 1101 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 EIF3EP60228 445 aaKnown RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 SP4Q02446 784 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 IRF8Q02556 426 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF33AQ06730 810 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 MGAT3Q09327 533 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 INAQ16352 499 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 PSMD5Q16401 504 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 BCL2A1Q16548 175 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 TPRXLQ17RH7 258 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF791Q3KP31 576 aaPredicted RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 GCSAMLQ5JQS6 135 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 TMEM236Q5W0B7 351 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 REEP3Q6NUK4 255 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 UNQ6190/PRO20217Q6UXQ8 127 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 Q6ZPB1 254 aaPredicted RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 NIPA1Q7RTP0 329 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 SCXQ7RTU7 201 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 H2BFWTQ7Z2G1 175 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ZFP82Q8N141 532 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ZIC4Q8N9L1 334 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF738Q8NE65 137 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 TRPV1Q8NER1 839 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 BPIFCQ8NFQ6 507 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 OR8S1Q8NH09 359 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 FAM57AQ8TBR7 257 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 RNF133Q8WVZ7 376 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 BAALCQ8WXS3 180 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 RSPH1Q8WYR4 309 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 DDIT4LQ96D03 193 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 RNF170Q96K19 258 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 SLC29A1Q99808 456 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 THUMPD2Q9BTF0 503 aaKnown RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 THTPAQ9BU02 230 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 EMC6Q9BV81 110 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 TPPP3Q9BW30 176 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 SFXN3Q9BWM7 321 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ANKRD60Q9BZ19 345 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 API5Q9BZZ5 524 aaKnown RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 TXNIPQ9H3M7 391 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 COQ10BQ9H8M1 238 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 RDH14Q9HBH5 336 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 MRM3Q9HC36 420 aaKnown RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ABCB9Q9NP78 766 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 NT5MQ9NPB1 228 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 HRASLS2Q9NWW9 162 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 BABAM2Q9NXR7 383 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 SLC39A1Q9NY26 324 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 UXTQ9UBK9 157 aaPredicted RBP-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 PSORS1C2Q9UIG4 136 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 LAMA4Q16363 1823 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF462Q96JM2 2506 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 KCPQ6ZWJ8 1503 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 SIGLEC1Q9BZZ2 1709 aa-0.18□□□□□ -2.44
SNORD28-201ENST00000384706 APCP25054 2843 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 AK9Q5TCS8 1911 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 AKNAQ7Z591 1439 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 A0A075B6Q4 140 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 IGHV3-21A0A0B4J1V1 117 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 A0A1B0GVG6 124 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 GMNCA6NCL1 334 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 SMCO2A6NFE2 343 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 A8MUN3 132 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 J3QQQ9 107 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 K7EQM0 130 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 RAB29O14966 203 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 PSPHP1O15172 72 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 CTNSO60931 367 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 CLDN11O75508 207 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 POP7O75817 140 aaKnown RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 IDH1O75874 414 aaKnown RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 IL1BP01584 269 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 SERPINE2P07093 398 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ANXA5P08758 320 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 KRTAP2-3P0C7H8 128 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF705DP0CH99 300 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF705BP0CI00 300 aaPredicted RBP-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 PGA4P0DJD7 388 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 PGA3P0DJD8 388 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 PGA5P0DJD9 388 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 CT45A6P0DMU7 189 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 CT45A5P0DMU8 189 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 CT45A7P0DMV0 189 aa-0.19□□□□□ -2.44
SNORD28-201ENST00000384706 ZNF7P17097 686 aaPredicted RBP-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms