RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 OR1M1Q8NGA1 313 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 OR13C5Q8NGS8 318 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 FAM168AQ92567 244 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 CCL17Q92583 94 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 HPS1Q92902 700 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 SPSB1Q96BD6 273 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 CKLFQ9UBR5 152 aa13.15□□□□□ -0.3
TRIM13-201ENST00000356017 ANKRD17O75179 2603 aaKnown RBP13.14□□□□□ -0.31
TRIM13-201ENST00000356017 ZNF732B4DXR9 585 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 CCRL2O00421 344 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 INMTO95050 263 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 ATF1P18846 271 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 COL8A2P25067 703 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 THBS2P35442 1172 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 CARTPTQ16568 116 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 ZNF181Q2M3W8 571 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 ACSM3Q53FZ2 586 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 SPRNQ5BIV9 151 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 MOGAT3Q86VF5 341 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 ZNF573Q86YE8 665 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 DNAAF1Q8NEP3 725 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 OR11L1Q8NGX0 322 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 Q8TCH9 128 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 OR14A2Q96R54 314 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 NDUFB11Q9NX14 153 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 ITGB1BP2Q9UKP3 347 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 PDZD2O15018 2839 aa13.14□□□□□ -0.31
TRIM13-201ENST00000356017 IGHV3-64DA0A0J9YX35 117 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 LRP5LA4QPB2 252 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 MAGEA13PA6NCF6 341 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 A6NLC8 198 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 TRIM64CA6NLI5 447 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 SULT1B1O43704 296 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 IRF2P14316 349 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 RAB3AP20336 220 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 GIFP27352 417 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 PPP3R1P63098 170 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 ZNF154Q13106 437 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 PRAMEF6Q5VXH4 476 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 DNM1P46Q6ZS02 220 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 PEG10Q86TG7 708 aaKnown RBP13.13□□□□□ -0.31
TRIM13-201ENST00000356017 C1orf87Q8N0U7 546 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 OR13C9Q8NGT0 318 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 PHYHIPQ92561 330 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 YIPF5Q969M3 257 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 TMEM203Q969S6 136 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 BORCS8Q96FH0 119 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 TLNRD1Q9H1K6 362 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 TMEM106BQ9NUM4 274 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 UFSP2Q9NUQ7 469 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 PQLC2LA1A4F0 135 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 CLDN25C9JDP6 229 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 LYNX1G3V0Z9 82 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 MAGEB3O15480 346 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 RP2O75695 350 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 SC5DO75845 299 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 LYNX1P0DP58 116 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 RBP2P50120 134 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 MPPED2Q15777 294 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 SSX1Q16384 188 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 DMRTC1Q5HYR2 192 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 UNQ9370/PRO34162Q6UXP9 181 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 WDR86Q86TI4 376 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 MUL1Q969V5 352 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 CPNE2Q96FN4 548 aaPredicted RBP13.13□□□□□ -0.31
TRIM13-201ENST00000356017 TIMD4Q96H15 378 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 DERL3Q96Q80 235 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 PIMREGQ9BSJ6 248 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 OR51I2Q9H344 312 aa13.13□□□□□ -0.31
TRIM13-201ENST00000356017 SF3B6Q9Y3B4 125 aaKnown RBP13.13□□□□□ -0.31
TRIM13-201ENST00000356017 NOTCH2Q04721 2471 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 TRBV5-7A0A0A0MS05 114 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 IGKV1-9A0A0C4DH69 117 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 FAM230AA0A1W2PPH8 454 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 GPX5O75715 221 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 FSTP19883 344 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 GALP22466 123 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 AZGP1P25311 298 aaKnown RBP13.12□□□□□ -0.31
TRIM13-201ENST00000356017 CFHR2P36980 270 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 TGFBR2P37173 567 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 ATP1B3P54709 279 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 RPS25P62851 125 aaKnown RBP13.12□□□□□ -0.31
TRIM13-201ENST00000356017 RIN1Q13671 783 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 ZNF529Q6P280 563 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 LHFPL2Q6ZUX7 228 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 CEACAM19Q7Z692 300 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 ZNF420Q8TAQ5 688 aaPredicted RBP13.12□□□□□ -0.31
TRIM13-201ENST00000356017 TRMT10AQ8TBZ6 339 aaKnown RBP13.12□□□□□ -0.31
TRIM13-201ENST00000356017 C10orf105Q8TEF2 133 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 FGF23Q9GZV9 251 aaPredicted RBP13.12□□□□□ -0.31
TRIM13-201ENST00000356017 TMEM138Q9NPI0 162 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 C1orf123Q9NWV4 160 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 TAS2R4Q9NYW5 299 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 TREM2Q9NZC2 230 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 RNF7Q9UBF6 113 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 FOXJ3Q9UPW0 622 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 CACNG2Q9Y698 323 aa13.12□□□□□ -0.31
TRIM13-201ENST00000356017 hCG_1807616A0A1W2PRN6 198 aa13.11□□□□□ -0.31
TRIM13-201ENST00000356017 CDIPTO14735 213 aa13.11□□□□□ -0.31
TRIM13-201ENST00000356017 RGS9O75916 674 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms