RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ZNF768Q9H5H4 540 aaKnown RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 A0A0U1RQK1 487 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 OR5H15A6NDH6 313 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 MT-CO2P00403 227 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 SEZ6L2Q6UXD5 910 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 SMRP1Q8NCR6 262 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 OR5M9Q8NGP3 310 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 OR6X1Q8NH79 312 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 CHST6Q9GZX3 395 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 CA10Q9NS85 328 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 H7C1Q1 480 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 HMGB3O15347 200 aaKnown RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 SFT2D2O95562 160 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 TXNDC12O95881 172 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 ZNF32P17041 273 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 ZP3P21754 424 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 RRADP55042 308 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 RAB35Q15286 201 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 HIST2H3PS2Q5TEC6 136 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 HSD17B13Q7Z5P4 300 aaPredicted RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 FIGNL2A6NMB9 653 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 ZNF724A8MTY0 619 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 ERVH48-1M5A8F1 160 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 RPS4Y1P22090 263 aaKnown RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 FUT6P51993 359 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 RAC1P63000 192 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 FLI1Q01543 452 aaPredicted RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 ZNF774Q6NX45 483 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 RBMS3Q6XE24 437 aaKnown RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 FAM181AQ8N9Y4 354 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 OR8B12Q8NGG6 310 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 OR1S2Q8NGQ3 325 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 C2CD4CQ8TF44 421 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 ASB10Q8WXI3 467 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 KISS1RQ969F8 398 aaPredicted RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 SCARF2Q96GP6 870 aaPredicted RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 SUCNR1Q9BXA5 334 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 TMEM100Q9NV29 134 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 CLEC1BQ9P126 229 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 URGCP-MRPS24S4R325 110 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 SOCS1O15524 211 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 TIMM8AO60220 97 aaPredicted RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 TUSC2O75896 110 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 DXOO77932 396 aaKnown RBP6.39□□□□□ -1.39
VCAN-202ENST00000342785 IFNA10P01566 189 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 CSF2RBP32927 897 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 RAB4BP61018 213 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 MGAT2Q10469 447 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 OR8G2PQ6IF36 304 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 MUCL1Q96DR8 90 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 SSX3Q99909 188 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 RHOFQ9HBH0 211 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 RAB18Q9NP72 206 aa6.39□□□□□ -1.39
VCAN-202ENST00000342785 LINC00862A6NCI5 91 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 ZFP92A6NM28 416 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 UPK3AO75631 287 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 TESK1Q15569 626 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 ZNF721Q8TF20 911 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 EXTL1Q92935 676 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 GNPNAT1Q96EK6 184 aaPredicted RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 FAAP24Q9BTP7 215 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 DEFB127Q9H1M4 99 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 RAB9BQ9NP90 201 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 P4HTMQ9NXG6 502 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 CYB5R1Q9UHQ9 305 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 ZNF318Q5VUA4 2279 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 CDC14BO60729 498 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 PJVKQ0ZLH3 352 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 IL11RAQ14626 422 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 GAB4Q2WGN9 574 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 LINC01590Q5TEZ4 76 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 ZFP82Q8N141 532 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 OR5AP2Q8NGF4 316 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 ALX4Q9H161 411 aaPredicted RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 PLK3Q9H4B4 646 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 UMAD1C9J7I0 102 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 SERPINA7P05543 415 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 CRHP06850 196 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 AADACP22760 399 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 SNCAP37840 140 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 EIF2S3P41091 472 aaKnown RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 AGFG1P52594 562 aaKnown RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 RAB11AP62491 216 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 MZT1Q08AG7 82 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 COL13A1Q5TAT6 717 aaPredicted RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 TWSG1Q9GZX9 223 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 UCK1Q9HA47 277 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 UFSP2Q9NUQ7 469 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 TOX3O15405 576 aaPredicted RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 PNPP00491 289 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 CST4P01036 141 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 TAGLN2P37802 199 aaKnown RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 SLC10A1Q14973 349 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 ACER2Q5QJU3 275 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 VHLLQ6RSH7 139 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 DMBX1Q8NFW5 382 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 MALSU1Q96EH3 234 aa6.38□□□□□ -1.39
VCAN-202ENST00000342785 HEYLQ9NQ87 328 aaPredicted RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 KLF13Q9Y2Y9 288 aaPredicted RBP6.38□□□□□ -1.39
VCAN-202ENST00000342785 TRBV5-5A0A0J9YX44 114 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms