RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 RAB4AP20338 218 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 FPR2P25090 351 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 SRSF5Q13243 272 aaKnown RBP11.84□□□□□ -0.51
COL2A1-201ENST00000337299 IL10RAQ13651 578 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 C16orf52Q8NHV5 167 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 PHOSPHO2Q8TCD6 241 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 PRSS27Q9BQR3 290 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 VAMP8Q9BV40 100 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 NMES1Q9C002 83 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 PTGES2Q9H7Z7 377 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 PDE7BQ9NP56 450 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 PARP11Q9NR21 331 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 ZDHHC8Q9ULC8 765 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 PAM16Q9Y3D7 125 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 POMT1Q9Y6A1 747 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
COL2A1-201ENST00000337299 TGIF2-C20orf24A0A0A6YYL0 155 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 A0A0J9YY10 115 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 A0A1W2PPE3 182 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 RNF222A6NCQ9 220 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 SOCS1O15524 211 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 AADACP22760 399 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 CCL4L1Q8NHW4 92 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 MRPL24Q96A35 216 aaKnown RBP11.84□□□□□ -0.51
COL2A1-201ENST00000337299 ZCCHC4Q9H5U6 513 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 BAXQ07812 192 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 ECH1Q13011 328 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 SPANXN5Q5MJ07 72 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 AADACL3Q5VUY0 350 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 RAET1LQ5VY80 246 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 NPSR1Q6W5P4 371 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 OR4C5Q8NGB2 326 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 DDIT4LQ96D03 193 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 ARV1Q9H2C2 271 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 SLC17A5Q9NRA2 495 aa11.84□□□□□ -0.51
COL2A1-201ENST00000337299 C20orf202A1L168 122 aa11.83□□□□□ -0.51
COL2A1-201ENST00000337299 A8MXE2 369 aa11.83□□□□□ -0.51
COL2A1-201ENST00000337299 G3V3Q6 166 aa11.83□□□□□ -0.51
COL2A1-201ENST00000337299 CHRNA7P36544 502 aa11.83□□□□□ -0.51
COL2A1-201ENST00000337299 SLC10A1Q14973 349 aa11.83□□□□□ -0.51
COL2A1-201ENST00000337299 MICBQ29980 383 aa11.83□□□□□ -0.51
COL2A1-201ENST00000337299 Q7L0L9 218 aa11.83□□□□□ -0.51
COL2A1-201ENST00000337299 SPRED2Q7Z698 418 aa11.83□□□□□ -0.51
COL2A1-201ENST00000337299 FAM58AQ8N1B3 248 aa11.83□□□□□ -0.51
COL2A1-201ENST00000337299 PBOV1Q9GZY1 135 aa11.83□□□□□ -0.51
COL2A1-201ENST00000337299 ZDHHC11Q9H8X9 412 aa11.83□□□□□ -0.51
COL2A1-201ENST00000337299 A0A087WV48 116 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 GSTP1P09211 210 aaKnown RBP11.83□□□□□ -0.52
COL2A1-201ENST00000337299 MPV17LQ2QL34 196 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 MAML2Q8IZL2 1156 aaPredicted RBP11.83□□□□□ -0.52
COL2A1-201ENST00000337299 TMEM100Q9NV29 134 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 CARHSP1Q9Y2V2 147 aaKnown RBP11.83□□□□□ -0.52
COL2A1-201ENST00000337299 TMEM127O75204 238 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 IGHG1P01857 330 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 ZBTB25P24278 435 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 RPS16P62249 146 aaKnown RBP11.83□□□□□ -0.52
COL2A1-201ENST00000337299 GABREP78334 506 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 CBLN3Q6UW01 205 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 CYB561D1Q8N8Q1 229 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 OR51B6Q9H340 312 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 PLEKHA3Q9HB20 300 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 MMP25Q9NPA2 562 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 DNAJB12Q9NXW2 375 aaKnown RBP11.83□□□□□ -0.52
COL2A1-201ENST00000337299 CHRNA9Q9UGM1 479 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 CT62P0C5K7 136 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 HIST1H1DP16402 221 aaKnown RBP11.83□□□□□ -0.52
COL2A1-201ENST00000337299 PPP1CCP36873 323 aaKnown RBP11.83□□□□□ -0.52
COL2A1-201ENST00000337299 PPICP45877 212 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 GABRA4P48169 554 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 SULT1A2P50226 295 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 NAAAQ02083 359 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 PLCXD3Q63HM9 321 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 PARM1Q6UWI2 310 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 DRAM2Q6UX65 266 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 NINJ1Q92982 152 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 OR14J1Q9UGF5 321 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 FUT9Q9Y231 359 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 PIGLQ9Y2B2 252 aa11.83□□□□□ -0.52
COL2A1-201ENST00000337299 MRPS18BQ9Y676 258 aaKnown RBP11.83□□□□□ -0.52
COL2A1-201ENST00000337299 TRPM6Q9BX84 2022 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 OR5AC1P0C628 307 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 EDN3P14138 238 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 ACKR3P25106 362 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 HBG1P69891 147 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 HBG2P69892 147 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 C1QL3Q5VWW1 255 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 ADAMTSL4Q6UY14 1074 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 TMEM156Q8N614 296 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 SPTSSAQ969W0 71 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 BORCS7Q96B45 105 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 ASB16Q96NS5 453 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 SUSD2Q9UGT4 822 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 NRXN2Q9P2S2 1712 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 A8MVM7 634 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 SEMA4FO95754 770 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 GUSBP08236 651 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 CTLA4P16410 223 aa11.82□□□□□ -0.52
COL2A1-201ENST00000337299 CSNK1EP49674 416 aaKnown RBP11.82□□□□□ -0.52
COL2A1-201ENST00000337299 ZNF92Q03936 586 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms