RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 AGERQ15109 404 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 ZNF385BQ569K4 471 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 UBALD1Q8TB05 177 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 TIMP4Q99727 224 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 OR2D2Q9H210 308 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 CHST8Q9H2A9 424 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 CDC14CA4D256 554 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 ADAP1O75689 374 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 HTR1DP28221 377 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 XKR7Q5GH72 579 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 CMTM4Q8IZR5 234 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 NUDT10Q8NFP7 164 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 NUDT11Q96G61 164 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 UTP23Q9BRU9 249 aaKnown RBP9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 APOBEC3BQ9UH17 382 aaKnown RBP9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 HOXD4P09016 255 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 THBS4P35443 961 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 C1orf61Q13536 156 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 NIT1Q86X76 327 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 C10orf126Q8N4M7 172 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 MRPL37Q9BZE1 423 aaKnown RBP9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 UFC1Q9Y3C8 167 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 OOEPA6NGQ2 149 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 PEX10O60683 326 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 FAM87AP0C7U9 286 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 POLR2IP36954 125 aaKnown RBP9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 GNG4P50150 75 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 ADPRHP54922 357 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 GPNMBQ14956 572 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 SLC35G1Q2M3R5 365 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 ACSM6Q6P461 480 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 VRK2Q86Y07 508 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 NIPSNAP1Q9BPW8 284 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 GREB1Q4ZG55 1949 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 CFHP08603 1231 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 CLDN17P56750 224 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 HERVK_113P61574 105 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 FIGLAQ6QHK4 219 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 ZNF775Q96BV0 537 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 PIAS3Q9Y6X2 628 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 H7C1C5 153 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 SIRPB1O00241 398 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 TMEM267Q0VDI3 215 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 IL13RA2Q14627 380 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 LINC00303Q3SY05 128 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 C15orf39Q6ZRI6 1047 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 EID2BQ96D98 161 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 SPACA9Q96E40 222 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 SLC22A13Q9Y226 551 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 GNB2P62879 340 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 RELQ04864 619 aaPredicted RBP9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 ERV3-1Q14264 604 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 SCAMP4Q969E2 229 aa9.39□□□□□ -0.91
SPTBN1-201ENST00000333896 SERPINE3A8MV23 424 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 ERVH48-1M5A8F1 160 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 P2RY10O00398 339 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 ORM1P02763 201 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 MT-ND6P03923 174 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 PRSS1P07477 247 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 GABRA6Q16445 453 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 GUCA2BQ16661 112 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 TFAP2EQ6VUC0 442 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 ERGIC1Q969X5 290 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 TBX15Q96SF7 602 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 JAM3Q9BX67 310 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 A4GNTQ9UNA3 340 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 PLXNA2O75051 1894 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 FPR2P25090 351 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 AMDHD2Q9Y303 409 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 WIPI2Q9Y4P8 454 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 NPTNQ9Y639 398 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 NPIPB9F8W1W9 429 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 SEMG1P04279 462 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 PTGER1P34995 402 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 GAB4Q2WGN9 574 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 MISPQ8IVT2 679 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 TMEM230Q96A57 120 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 SPANXCQ9NY87 97 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 PSENENQ9NZ42 101 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 CHST2Q9Y4C5 530 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 ISLRO14498 428 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 ONECUT2O95948 504 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 GLI4P10075 376 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 ACRP10323 421 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 FAM3AP98173 230 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 SPATA45Q537H7 98 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 PRSS54Q6PEW0 395 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 FOXK2Q01167 660 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 LHFPL4Q7Z7J7 247 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 NMNAT3Q96T66 252 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 RNF2Q99496 336 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 OR6C3Q9NZP0 311 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 SHHQ15465 462 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 LEFTY2O00292 366 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 GP1BAP07359 652 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 MMP16P51512 607 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 KCNAB1Q14722 419 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 EXOSC7Q15024 291 aaKnown RBP9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 TMEM116Q8NCL8 245 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 ACER3Q9NUN7 267 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms