RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CNR1P21554 472 aa12.97□□□□□ -0.33
CLCNKA-201ENST00000331433 HTR5AP47898 357 aa12.97□□□□□ -0.33
CLCNKA-201ENST00000331433 ATXN7L3Q14CW9 347 aaPredicted RBP12.97□□□□□ -0.33
CLCNKA-201ENST00000331433 LPCAT3Q6P1A2 487 aa12.97□□□□□ -0.33
CLCNKA-201ENST00000331433 PPP1R1CQ8WVI7 109 aa12.97□□□□□ -0.33
CLCNKA-201ENST00000331433 MICU1Q9BPX6 476 aa12.97□□□□□ -0.33
CLCNKA-201ENST00000331433 GHRLQ9UBU3 117 aa12.97□□□□□ -0.33
CLCNKA-201ENST00000331433 SDCBPO00560 298 aaPredicted RBP12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 ANGPTL7O43827 346 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 NEURL1O76050 574 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 SPDEFO95238 335 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 ATP1B3P54709 279 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 MTCP1P56278 107 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 PSG4Q00888 419 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 SRYQ05066 204 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 SCRN3Q0VDG4 424 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 BAMBIQ13145 260 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 EIF3IQ13347 325 aaKnown RBP12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 GK2Q14410 553 aaPredicted RBP12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 FAM189A2Q15884 450 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 AANATQ16613 207 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 VAX1Q5SQQ9 334 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 SLC16A14Q7RTX9 510 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 CCDC28AQ8IWP9 274 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 OR5H2Q8NGV7 314 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 ANGPTL6Q8NI99 470 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 C1QTNF6Q9BXI9 259 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 PECRQ9BY49 303 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 C5orf66Q9H5L9 145 aa12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 TMA7Q9Y2S6 64 aaKnown RBP12.96□□□□□ -0.33
CLCNKA-201ENST00000331433 FAM230AA0A1W2PPH8 454 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 OR6C6A6NF89 314 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 B3GALNT1O75752 331 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 HTR3BO95264 441 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 PDGFAP04085 211 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 TMEM225BP0DP42 221 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 CD59P13987 128 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 GABRR1P24046 479 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 MPGP29372 298 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 SNU13P55769 128 aaKnown RBP12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 SRSF4Q08170 494 aaKnown RBP12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 CDCP2Q5VXM1 449 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 FAHD2BQ6P2I3 314 aaPredicted RBP12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 FAHD2AQ96GK7 314 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 CXorf58Q96LI9 332 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 GPR35Q9HC97 309 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 RDH8Q9NYR8 311 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 KIF25Q9UIL4 384 aa12.96□□□□□ -0.34
CLCNKA-201ENST00000331433 URB1O60287 2271 aaKnown RBP12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 EEF1E1-BLOC1S5C9J1V9 151 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 SPRY1O43609 319 aaPredicted RBP12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 CYTIPO60759 359 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 NMBP08949 121 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 C1QTNF12Q5T7M4 302 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 ZNF660Q6AZW8 331 aaPredicted RBP12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 C6orf201Q7Z4U5 140 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 SKA3Q8IX90 412 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 ARRDC1Q8N5I2 433 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 CSNK2A3Q8NEV1 391 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 CPNE4Q96A23 557 aaPredicted RBP12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 C10orf35Q96D05 121 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 OR2H1Q9GZK4 316 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 WNT5BQ9H1J7 359 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 BOKQ9UMX3 212 aaPredicted RBP12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 IGKV1-27A0A075B6S5 117 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 DUS4LO95620 317 aaKnown RBP12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 CPT2P23786 658 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 FGL1Q08830 312 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 RIPPLY1Q0D2K3 151 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 ZNF528Q3MIS6 628 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 ACTBL2Q562R1 376 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 BEX5Q5H9J7 111 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 NKAPLQ5M9Q1 402 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 C11orf87Q6NUJ2 197 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 NAXEQ8NCW5 288 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 OR2M7Q8NG81 312 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 OR13G1Q8NGZ3 307 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 TMEM230Q96A57 120 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 TM2D1Q9BX74 207 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 PLA2G3Q9NZ20 509 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 PRR13Q9NZ81 148 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 COMMD9Q9P000 198 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 GPR132Q9UNW8 380 aa12.95□□□□□ -0.34
CLCNKA-201ENST00000331433 CDX4O14627 284 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 RLN2P04090 185 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 HLA-GP17693 338 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 CBX5P45973 191 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 OR3A2P47893 321 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 ABHD17BQ5VST6 288 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 OR6K3Q8NGY3 331 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 WBP1Q96G27 269 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 ZNF703Q9H7S9 590 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 ZNF701Q9NV72 531 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 ZNF581Q9P0T4 197 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 MCTS1Q9ULC4 181 aaKnown RBP12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 MRPS18CQ9Y3D5 142 aaKnown RBP12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 TIMM10BQ9Y5J6 103 aa12.94□□□□□ -0.34
CLCNKA-201ENST00000331433 C13orf42A0A1B0GVH6 325 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms