RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 DNM1P46Q6ZS02 220 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 PGAP1Q75T13 922 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 MRPL21Q7Z2W9 205 aaKnown RBP4.99□□□□□ -1.61
SSX3-201ENST00000298396 C1orf174Q8IYL3 243 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 OR10AD1Q8NGE0 317 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 NINJ1Q92982 152 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 YIPF5Q969M3 257 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 ORAI1Q96D31 301 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 SMIM19Q96E16 107 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 ADAT3Q96EY9 351 aaPredicted RBP4.99□□□□□ -1.61
SSX3-201ENST00000298396 FAM71F1Q96KD3 344 aaPredicted RBP4.99□□□□□ -1.61
SSX3-201ENST00000298396 COG8Q96MW5 612 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 MND1Q9BWT6 205 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 PPIL3Q9H2H8 161 aaKnown RBP4.99□□□□□ -1.61
SSX3-201ENST00000298396 RGCCQ9H4X1 137 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 ZNF696Q9H7X3 374 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 FAIMQ9NVQ4 179 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 PIGLQ9Y2B2 252 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 CACNG2Q9Y698 323 aa4.99□□□□□ -1.61
SSX3-201ENST00000298396 IGKV1-27A0A075B6S5 117 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 A0A096LNT2 108 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 TRBV5-7A0A0A0MS05 114 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 IGKV1-9A0A0C4DH69 117 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 TRBV2A0A0J9YWF9 115 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 IGHV3-64DA0A0J9YX35 117 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 TRBV5-5A0A0J9YX44 114 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 ANKRD61A6NGH8 418 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 GGT3PA6NGU5 568 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 TMEM212A6NML5 194 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 ZNF850A8MQ14 1090 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 MYL12BO14950 172 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 PIN1P1O15428 100 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 SPRY3O43610 288 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 PLPP2O43688 288 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 MRPS14O60783 128 aaKnown RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 RP2O75695 350 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 INMTO95050 263 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 PTBP3O95758 552 aaKnown RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 CST4P01036 141 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 CD55P08174 381 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 UBCP0CG48 685 aaKnown RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 ACHEP22303 614 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 EEF1B2P24534 225 aaKnown RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 DNASE1P24855 282 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 COL8A2P25067 703 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 THBS2P35442 1172 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 LIPAP38571 399 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 CD200P41217 278 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 ZNF81P51508 661 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 RPS25P62851 125 aaKnown RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 CCL8P80075 99 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 BDH1Q02338 343 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 SLC3A1Q07837 685 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 PRDX4Q13162 271 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 SPHARQ15513 63 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 TSTQ16762 297 aaKnown RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 LIPKQ5VXJ0 399 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 ZNF529Q6P280 563 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 RPL22L1Q6P5R6 122 aaKnown RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 UNQ6126/PRO20091Q6UXV3 157 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 DOK3Q7L591 496 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 C11orf53Q8IXP5 236 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 OR2Z1Q8NG97 314 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 OR5AK2Q8NH90 309 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 ITLN1Q8WWA0 313 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 GHSRQ92847 366 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 ELMOD3Q96FG2 381 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 TRMT61AQ96FX7 289 aaKnown RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 PERPQ96FX8 193 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 MRPL48Q96GC5 212 aaKnown RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 VRK1Q99986 396 aaPredicted RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 CCDC90BQ9GZT6 254 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 CXXC4Q9H2H0 198 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 OPA3Q9H6K4 179 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 SP140LQ9H930 580 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 DYNLRB1Q9NP97 96 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 TRIM36Q9NQ86 728 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 BEX4Q9NWD9 120 aaPredicted RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 NKIRAS2Q9NYR9 191 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 MRPL15Q9P015 296 aaKnown RBP4.98□□□□□ -1.61
SSX3-201ENST00000298396 ZNF391Q9UJN7 358 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 BLOC1S6Q9UL45 172 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 ERGIC3Q9Y282 383 aa4.98□□□□□ -1.61
SSX3-201ENST00000298396 MTORP42345 2549 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 NSD1Q96L73 2696 aaPredicted RBP4.97□□□□□ -1.61
SSX3-201ENST00000298396 ZNF816-ZNF321PA0A0X1KG74 233 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 A0A1B0GVI7 797 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 MAGEA13PA6NCF6 341 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 DHRS7CA6NNS2 312 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 SYT7O43581 403 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 GMDSO60547 372 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 SC5DO75845 299 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 TNFAIP8O95379 198 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 CD1AP06126 327 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 ATP6V1B1P15313 513 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 CPEP16870 476 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 CELP19835 753 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 CFL1P23528 166 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms