RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 ERCC1P07992 297 aaPredicted RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 AKR1C4P17516 323 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 PAX6P26367 422 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 TRIP6Q15654 476 aaKnown RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 TEX30Q5JUR7 227 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 LINC00346Q8IVM7 164 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 ADAMTS17Q8TE56 1095 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 ZNF775Q96BV0 537 aaPredicted RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 FBXO17Q96EF6 278 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 SLC25A44Q96H78 314 aaPredicted RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 NIT2Q9NQR4 276 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 RHBDD3Q9Y3P4 386 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 PCDHGA1Q9Y5H4 931 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 A0A1W2PPE3 182 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 EIF1BO60739 113 aaKnown RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 CD63P08962 238 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 LIFP15018 202 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 EIF1P41567 113 aaKnown RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 CAV2P51636 162 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 SPOCK1Q08629 439 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 ZP4Q12836 540 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 EIF2B1Q14232 305 aaKnown RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 TSC22D1Q15714 1073 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 ZNF260Q3ZCT1 412 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 ACER2Q5QJU3 275 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 FAHD2BQ6P2I3 314 aaPredicted RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 UEVLDQ8IX04 471 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 JAGN1Q8N5M9 183 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 C14orf79Q96F83 325 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 FAHD2AQ96GK7 314 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 THOC3Q96J01 351 aaKnown RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 EGLN1Q9GZT9 426 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 SEBOXQ9HB31 216 aaPredicted RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 CKLFQ9UBR5 152 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 IGHV3-15A0A0B4J1V0 119 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 EIF1AYO14602 144 aaKnown RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 CD37P11049 281 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 CRABP1P29762 137 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 HRH1P35367 487 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 EIF1AXP47813 144 aaKnown RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 PPT1P50897 306 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 ZNF679Q8IYX0 411 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 OR4D6Q8NGJ1 314 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 HIST1H2BAQ96A08 127 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 NMES1Q9C002 83 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 SEC61A2Q9H9S3 476 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 PARD6AQ9NPB6 346 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 KLHL13Q9P2N7 655 aa11.53□□□□□ -0.56
PLOD3-201ENST00000223127 NOSIPQ9Y314 301 aaKnown RBP11.53□□□□□ -0.56
PLOD3-201ENST00000223127 LOC101059948A0A1B0GTJ6 334 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 A6NIZ1 184 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 C9JQL5 133 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 P04436 131 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 ZNF44P15621 663 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 LPAR6P43657 344 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 SLC6A9P48067 706 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 RAP1BP61224 184 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 RAP1AP62834 184 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 ZNF585AQ6P3V2 769 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 RTN4RL2Q86UN3 420 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 SMIM8Q96KF7 97 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 CLCC1Q96S66 551 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 KCNK17Q96T54 332 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 OR5AC2Q9NZP5 309 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 IL17BQ9UHF5 180 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 GDF2Q9UK05 429 aaPredicted RBP11.52□□□□□ -0.57
PLOD3-201ENST00000223127 C1orf196B1AJZ1 125 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 ZIC3O60481 467 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 S100A9P06702 114 aaKnown RBP11.52□□□□□ -0.57
PLOD3-201ENST00000223127 CD2P06729 351 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 ZNF823P16415 610 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 HGFACQ04756 655 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 SMCO1Q147U7 214 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 SLC18B1Q6NT16 456 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 YRDCQ86U90 279 aaKnown RBP11.52□□□□□ -0.57
PLOD3-201ENST00000223127 NAA40Q86UY6 237 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 CATSPERDQ86XM0 798 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 FAM219AQ8IW50 185 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 C15orf54Q8N8G6 183 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 DEFB124Q8NES8 71 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 MICU1Q9BPX6 476 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 ABHD6Q9BV23 337 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 SH2D2AQ9NP31 389 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 SMCO4Q9NRQ5 59 aa11.52□□□□□ -0.57
PLOD3-201ENST00000223127 PCSK5Q92824 1860 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 FAM157AC9JC47 383 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 RAB27BO00194 218 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 LMX1BO60663 402 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 AKR1C3P42330 323 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 CX3CR1P49238 355 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 EIF2S3LQ2VIR3 472 aaKnown RBP11.51□□□□□ -0.57
PLOD3-201ENST00000223127 AKIRIN2Q53H80 203 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 SPINK14Q6IE38 97 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 NAA11Q9BSU3 229 aaPredicted RBP11.51□□□□□ -0.57
PLOD3-201ENST00000223127 RIF1Q5UIP0 2472 aaKnown RBP11.51□□□□□ -0.57
PLOD3-201ENST00000223127 ZNF318Q5VUA4 2279 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 LOC390937A0A1W2PQ73 354 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 RNASEK-C17orf49H0YIS7 233 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 SERPINA7P05543 415 aa11.51□□□□□ -0.57
PLOD3-201ENST00000223127 DSCR4P56555 118 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms