RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 HIST2H3AQ71DI3 136 aa19.47■□□□□ 0.71
CCDC9-201ENST00000221922 TMEM185AQ8NFB2 350 aa19.47■□□□□ 0.71
CCDC9-201ENST00000221922 KCNE4Q8WWG9 221 aa19.47■□□□□ 0.71
CCDC9-201ENST00000221922 NABP1Q96AH0 204 aa19.47■□□□□ 0.71
CCDC9-201ENST00000221922 SOX7Q9BT81 388 aa19.47■□□□□ 0.71
CCDC9-201ENST00000221922 CHMP1AQ9HD42 196 aaPredicted RBP19.47■□□□□ 0.71
CCDC9-201ENST00000221922 ZC4H2Q9NQZ6 224 aa19.47■□□□□ 0.71
CCDC9-201ENST00000221922 GPR132Q9UNW8 380 aa19.47■□□□□ 0.71
CCDC9-201ENST00000221922 BDP1A6H8Y1 2624 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 MPTX1A8MV57 137 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 C9orf172C9J069 976 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 DNASE2O00115 360 aaPredicted RBP19.46■□□□□ 0.71
CCDC9-201ENST00000221922 SOCS1O15524 211 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 IGLV3-1P01715 115 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 SERPINF1P36955 418 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 OR3A4PP47883 348 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 CYCSP99999 105 aaKnown RBP19.46■□□□□ 0.71
CCDC9-201ENST00000221922 CCDC36Q8IYA8 594 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 CCDC54Q8NEL0 328 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 OR5AP2Q8NGF4 316 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 SSC4DQ8WTU2 575 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 OCSTAMPQ9BR26 566 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 P4HTMQ9NXG6 502 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 FOXD3Q9UJU5 478 aaPredicted RBP19.46■□□□□ 0.71
CCDC9-201ENST00000221922 PCSK5Q92824 1860 aa19.46■□□□□ 0.71
CCDC9-201ENST00000221922 TEX13DA0A0J9YY54 714 aaPredicted RBP19.45■□□□□ 0.7
CCDC9-201ENST00000221922 C5orf51A6NDU8 294 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 CDX4O14627 284 aaPredicted RBP19.45■□□□□ 0.7
CCDC9-201ENST00000221922 NUPL2O15504 423 aaKnown RBP19.45■□□□□ 0.7
CCDC9-201ENST00000221922 MPIG6BO95866 241 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 TMEM50BP56557 158 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 RAC3P60763 192 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 ECH1Q13011 328 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 PNLDC1Q8NA58 520 aaKnown RBP19.45■□□□□ 0.7
CCDC9-201ENST00000221922 PIK3IP1Q96FE7 263 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 LRRC46Q96FV0 321 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 GPER1Q99527 375 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 RBM24Q9BX46 236 aaKnown RBP19.45■□□□□ 0.7
CCDC9-201ENST00000221922 ULBP2Q9BZM5 246 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 FGF16O43320 207 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 THBS4P35443 961 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 B3GALT5-AS1P59052 145 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 ACER2Q5QJU3 275 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 C20orf196Q8IYI0 205 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 MARC2Q969Z3 335 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 CDC6Q99741 560 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 RNF126Q9BV68 326 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 TMEM59Q9BXS4 323 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 C5orf66Q9H5L9 145 aa19.45■□□□□ 0.7
CCDC9-201ENST00000221922 A0A0B4J2A0 478 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 RAB19A4D1S5 217 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 ATP6V1G2-DDX39BF2Z307 99 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 ANOS1P23352 680 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 ESX1Q8N693 406 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 ZIC4Q8N9L1 334 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 TMEM230Q96A57 120 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 GHRLQ9UBU3 117 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 SHPKQ9UHJ6 478 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 CSAG2Q9Y5P2 127 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 WDFY3Q8IZQ1 3526 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 A0A0G2JMM0 328 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 C13orf42A0A1B0GVH6 325 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 A0A1W2PPB8 328 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 A0A1W2PRS3 328 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 KIR3DP1A8MWS1 328 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 MFNGO00587 321 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 RAD51DO75771 328 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 PRF1P14222 555 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 PGAM2P15259 253 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 OTX1P32242 354 aaPredicted RBP19.44■□□□□ 0.7
CCDC9-201ENST00000221922 SLC6A9P48067 706 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 NAAAQ02083 359 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 OR56B1Q8NGI3 324 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 URM1Q9BTM9 101 aaKnown RBP19.44■□□□□ 0.7
CCDC9-201ENST00000221922 SRXN1Q9BYN0 137 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 PCDHB10Q9UN67 800 aa19.44■□□□□ 0.7
CCDC9-201ENST00000221922 CFAP54Q96N23 3096 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 SDK2Q58EX2 2172 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 F5H5K5 113 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 DHRS3O75911 302 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 SFT2D2O95562 160 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 MRPS34P82930 218 aaKnown RBP19.43■□□□□ 0.7
CCDC9-201ENST00000221922 PEG10Q86TG7 708 aaKnown RBP19.43■□□□□ 0.7
CCDC9-201ENST00000221922 LRRC18Q8N456 261 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 SLC30A7Q8NEW0 376 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 OR14L1PQ8NHC6 308 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 SPTSSAQ969W0 71 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 BANF2Q9H503 90 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 FLVCR1Q9Y5Y0 555 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 V9GYS6 101 aa19.43■□□□□ 0.7
CCDC9-201ENST00000221922 OR5H15A6NDH6 313 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 CBX5P45973 191 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 UNQ6126/PRO20091Q6UXV3 157 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 FAM89BQ8N5H3 189 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 OR1S2Q8NGQ3 325 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 PP6455Q8WZ26 134 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 C10orf35Q96D05 121 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 LYZL4Q96KX0 146 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 RAB18Q9NP72 206 aa19.42■□□□□ 0.7
CCDC9-201ENST00000221922 TMEM100Q9NV29 134 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms