RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 C6orf201Q7Z4U5 140 aa16.82■□□□□ 0.28
MBD3-201ENST00000156825 OR52N4Q8NGI2 321 aa16.82■□□□□ 0.28
MBD3-201ENST00000156825 FAAP24Q9BTP7 215 aa16.82■□□□□ 0.28
MBD3-201ENST00000156825 HES7Q9BYE0 225 aa16.82■□□□□ 0.28
MBD3-201ENST00000156825 FLRT3Q9NZU0 649 aa16.82■□□□□ 0.28
MBD3-201ENST00000156825 CRYM-AS1A6NIL9 109 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 NLRC3Q7RTR2 1065 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 LHX4Q969G2 390 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 STRCP1A6NGW2 1772 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 DCTN6O00399 190 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 JTBO76095 146 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 IGHA2P01877 340 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 WNT1P04628 370 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 TRAPPC2P0DI81 140 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 TRAPPC2BP0DI82 140 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 HMGA2P52926 109 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 SLC25A1P53007 311 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 CHST6Q9GZX3 395 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 DLL4Q9NR61 685 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 A0A1B0GUH1 482 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 THBS4P35443 961 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 RAB13P51153 203 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 SMIM21Q3B7S5 101 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 C15orf54Q8N8G6 183 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 RASL10BQ96S79 203 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 NMES1Q9C002 83 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 OR7C2O60412 319 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 ICMTO60725 284 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 EXOSC2Q13868 293 aaKnown RBP16.81■□□□□ 0.28
MBD3-201ENST00000156825 GALNT16Q8N428 558 aa16.81■□□□□ 0.28
MBD3-201ENST00000156825 A0A1W2PPV9 198 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 A0A1W2PQF6 199 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 FAM90A27PA6NNH2 459 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 FUT3P21217 361 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 HOXD11P31277 338 aaPredicted RBP16.8■□□□□ 0.28
MBD3-201ENST00000156825 QPCTLQ9NXS2 382 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 PLPP3O14495 311 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 RTL8BQ17RB0 113 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 OR10AC1Q8NH08 325 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 GALMQ96C23 342 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 LIN7CQ9NUP9 197 aaKnown RBP16.8■□□□□ 0.28
MBD3-201ENST00000156825 OR2M5A3KFT3 312 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 HOXC4P09017 264 aaPredicted RBP16.8■□□□□ 0.28
MBD3-201ENST00000156825 MMP15P51511 669 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 SUB1P53999 127 aaKnown RBP eCLIP16.8■□□□□ 0.28
MBD3-201ENST00000156825 RAC1P63000 192 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 UBE2IP63279 158 aaKnown RBP16.8■□□□□ 0.28
MBD3-201ENST00000156825 SMIM15Q7Z3B0 74 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 SMRP1Q8NCR6 262 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 TERTO14746 1132 aaKnown RBP16.8■□□□□ 0.28
MBD3-201ENST00000156825 SSPNQ14714 243 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 PXDC1Q5TGL8 231 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 CT55Q8WUE5 264 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 PSENENQ9NZ42 101 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 CCL27Q9Y4X3 112 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 PLPP2O43688 288 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 HEXAP06865 529 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 GZMKP49863 264 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 TMEM52Q8NDY8 209 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 OR4F5Q8NH21 305 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 C2CD4CQ8TF44 421 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 OR4F4Q96R69 305 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 DOK1Q99704 481 aa16.8■□□□□ 0.28
MBD3-201ENST00000156825 DTYMKP23919 212 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 OR3A4PP47883 348 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 CDONQ4KMG0 1287 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 AARDQ4LEZ3 155 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 PLAC9Q5JTB6 97 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 NAA40Q86UY6 237 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 C2orf50Q96LR7 162 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 ZNF75AQ96N20 296 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 CLEC1BQ9P126 229 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 KIAA1456Q9P272 454 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 TRAF3IP2O43734 574 aaPredicted RBP16.79■□□□□ 0.28
MBD3-201ENST00000156825 TGM1P22735 817 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 RAB35Q15286 201 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 FAM122CQ6P4D5 195 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 PIGMQ9H3S5 423 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 OR5V1Q9UGF6 321 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 TMEM272A0A1B0GTI8 110 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 GNG10P50151 68 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 LIMK1P53667 647 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 ZNF141Q15928 474 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 AVPI1Q5T686 147 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 ERGIC1Q969X5 290 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 SCO1O75880 301 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 GNG3P63215 75 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 ARL16Q0P5N6 197 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 OR10Z1Q8NGY1 313 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 VSTM2LQ96N03 204 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 SLC25A32Q9H2D1 315 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 KCNIP2Q9NS61 270 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 FOXJ3Q9UPW0 622 aa16.79■□□□□ 0.28
MBD3-201ENST00000156825 MT-ND4LP03901 98 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 PDZK1IP1Q13113 114 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 EIF3IQ13347 325 aaKnown RBP16.78■□□□□ 0.28
MBD3-201ENST00000156825 DRAM2Q6UX65 266 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 BAP18Q8IXM2 172 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 ZNF680Q8NEM1 530 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 SMCO4Q9NRQ5 59 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms