RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Pkd1l3Q2EG98 2201 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gm39566A0A1B0GT45 1251 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Muc3E9PWP7 378 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Vmn1r68E9Q0V3 319 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gm21897J3KMP5 500 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Vmn2r124K7N789 855 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 St8sia5P70126 412 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 TsxP70675 144 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Dok1P97465 482 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Hormad2Q5SQP1 306 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Vmn1r21Q8R2C6 297 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Mfsd6lQ8R3N2 586 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Naa40Q8VE10 237 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Olfr1443Q8VFW8 312 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Q9D8N1 392 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Galnt16Q9JJ61 558 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Mlf1Q9QWV4 267 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gk2Q9WU65 554 aa22.69■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Olfr785A0A0N4SVC3 312 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gm10358A0A1D5RLD8 333 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gm5796E9Q7M8 205 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Vmn1r58G3X9U3 310 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gm3629K7N6Y2 205 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gm3696K7N751 203 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gm8281L7N235 204 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 GapdhP16858 333 aaKnown RBP22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Cav3P51637 151 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Zglp1Q1WG82 266 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Opa3Q505D7 179 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Uhrf2Q7TMI3 803 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Tas2r3Q7TQA7 316 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Cela3bQ9CQ52 269 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Tex29Q9DA77 186 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Olfr27Q9EQ90 311 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gm3839S4R1W1 333 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Tanc2A2A690 1994 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Ccdc9bA3KGF9 545 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gm5519D3Z175 170 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Vmn1r34G3XA52 309 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Nipsnap1O55125 284 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 A4gntQ14BT6 341 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Ranbp3lQ6PDH4 491 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 AardQ811W1 167 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Olfr994Q8VF73 314 aa22.68■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Tex38A2A8T7 201 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gm14409A2ARR8 349 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Olfr1156A2AVC3 323 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gm13178B1AVU7 408 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Zfp141G3UY09 685 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 2010315B03RikJ3QK55 433 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Kcnj1O88335 372 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 HckP08103 524 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 S100a6P14069 89 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Il10P18893 178 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 MpgQ04841 333 aaKnown RBP22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Acp5Q05117 327 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Parp16Q7TMM8 322 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Las2Q8CB14 526 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Rnf121Q8R1Z9 327 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Hyal1Q91ZJ9 462 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 DhdhQ9DBB8 333 aa22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Nova1Q9JKN6 507 aaKnown RBP22.67■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Rpl7a-ps5A0A140T8L3 268 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Slco5a1E9PVD9 850 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Atp5j2P56135 88 aaKnown RBP22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 UmodQ91X17 642 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Bod1lE9Q6J5 3032 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Igkv6-23A0A140T8N5 115 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Cacng2O88602 323 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Zfp13P10754 512 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Camk2bP28652 542 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Ikzf2P81183 526 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Slc34a1Q60825 637 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Slc17a1Q61983 465 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Fam57bQ7TNV1 275 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Cdadc1Q8BMD5 523 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 BivmQ8CBX9 502 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Slc38a1Q8K2P7 485 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Slc25a28Q8R0Z5 364 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Olfr780Q8VEU0 312 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Nrif2Q921B4 824 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Tmem54Q9D7S1 219 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Arfgap3Q9D8S3 523 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Tex44Q9DA60 530 aa22.66■■□□□ 1.22
Tpm1-216ENSMUST00000113707 C3ar1O09047 477 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 NlkO54949 527 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Amy2P00688 508 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Cbr2P08074 244 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gpm6aP35802 278 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Ear2P97425 156 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Lrfn3Q8BLY3 626 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Tor2aQ8R1J9 321 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Ccdc115Q8VE99 180 aaKnown RBP22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Elac1Q8VEB6 362 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Ubl7Q91W67 380 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 GpnmbQ99P91 574 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Hoga1Q9DCU9 321 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Gpx2Q9JHC0 190 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 Slc15a1Q9JIP7 709 aa22.65■■□□□ 1.22
Tpm1-216ENSMUST00000113707 ChrdQ9Z0E2 948 aa22.65■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms