RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ddah2Q99LD8 285 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Ighv1-13A0A075B5I0 98 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr1255A2AUA4 310 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Wscd2D4PHA7 571 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Pax7P47239 503 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Atp5j2P56135 88 aaKnown RBP14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Zfp790Q80ZX2 779 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Q9CQM1 111 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Izumo1Q9D9J7 397 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Slc2a8Q9JIF3 477 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm884A2A9H6 3643 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 1700025B11RikA0A087WNZ6 93 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Hacd4A2AKM2 232 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr1214A2ATG3 311 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr1156A2AVC3 323 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Vmn1r68E9Q0V3 319 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Scand1Q2M4I6 142 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Spc25Q3UA16 226 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tas2r120Q7M721 295 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Pxdc1Q8JZU6 231 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr497Q8VG08 314 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Eif1bQ9CXU9 113 aa14.05□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm42372A0A1B0GT27 204 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Dcaf10A2AKB9 566 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm5519D3Z175 170 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Zfp141G3UY09 685 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Lmx1bO88609 395 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Crisp2P16563 243 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Atf4Q06507 349 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 CcnjQ3TZI6 379 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Csnk2a1Q60737 391 aaKnown RBP14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr851Q7TRG0 312 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr506Q7TRU6 314 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr314Q7TRZ7 330 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tbl1xr1Q8BHJ5 514 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Vmn1r228Q8R2A7 333 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Ntng2Q8R4F1 589 aaKnown RBP14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Uqcrc1Q9CZ13 480 aaKnown RBP14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tex44Q9DA60 530 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Prok2Q9QXU7 128 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm3543D3Z235 184 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Zfp944E9PUS4 492 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Vmn1r7E9Q8T0 311 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 RradO88667 308 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gch1Q05915 241 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 NppcQ61839 126 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Slc25a47Q6IS41 310 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Cdk3Q80YP0 303 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Rcc2Q8BK67 520 aaKnown RBP14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Defb21Q8C5Z4 100 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Fate1Q8CEK7 99 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 B4galt7Q8R087 327 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Slc25a28Q8R0Z5 364 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr969Q8VG89 311 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr829Q8VGX1 321 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Sfxn5Q925N0 342 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Park7Q99LX0 189 aaKnown RBP14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Arfgap3Q9D8S3 523 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Dock11A2AF47 2073 aa14.04□□□□□ -0.16
Trim39-203ENSMUST00000113706 Plscr5J3QM92 274 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Stmn3O70166 180 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Fam71f1Q3UZD7 341 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Uhrf2Q7TMI3 803 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Rrnad1Q8BZG5 475 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Klk14Q8CGR5 250 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 TardbpQ921F2 414 aaKnown RBP14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Cmtm3Q99LJ5 184 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Fabp7P51880 132 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 AmbpQ07456 349 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Ndufb6Q3UIU2 128 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Acsf3Q3URE1 583 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Vezf1Q5SXC4 518 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr11Q60890 313 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Commd2Q8BXC6 199 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Vmn1r72Q8K3N7 306 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 C8gQ8VCG4 202 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 1700034E13RikQ9D2T6 108 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Mgat4cQ9D306 478 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Vmn1r48Q9EQ52 302 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Zfp456B2RUK9 458 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Zmat3O54836 290 aaKnown RBP14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr90Q0VEL5 310 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Adam5Q3TTE0 751 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 N6amt1Q6SKR2 214 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Tdpoz5Q6YCH1 340 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Arf2Q8BSL7 181 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr803Q8VFI3 308 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr837Q8VFJ4 312 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Ccdc167Q9D162 97 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Actr6Q9D864 396 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Samd8Q9DA37 478 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Olfr944Q9EQ91 311 aa14.03□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm29276A0A087WNW5 222 aa14.02□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm20792A0A087WRF5 222 aa14.02□□□□□ -0.16
Trim39-203ENSMUST00000113706 2610044O15Rik8A0A087WRJ1 410 aa14.02□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm28490A0A087WRT9 222 aa14.02□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm21996A0A087WSS9 222 aa14.02□□□□□ -0.16
Trim39-203ENSMUST00000113706 Vmn1r14H3BJ46 303 aa14.02□□□□□ -0.16
Trim39-203ENSMUST00000113706 Gm5225J3QPL3 108 aa14.02□□□□□ -0.16
Trim39-203ENSMUST00000113706 KitlgP20826 273 aa14.02□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms