RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 CcnkO88874 554 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 TpbpaP13438 124 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Cox4i1P19783 169 aaKnown RBP20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Alox5apP30355 161 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 P2rx1P51576 399 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 PitpnbP53811 271 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Kcnn3P58391 732 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Olfr733Q14AK5 308 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Nup62Q63850 526 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Slc34a3Q80SU6 601 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Gadl1Q80WP8 550 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Fmr1nbQ80ZA7 238 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Cpne4Q8BLR2 557 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Trmt6Q8CE96 497 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Lsm10Q8QZX5 122 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Tor2aQ8R1J9 321 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Olfr1100Q8VFM1 321 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Olfr970Q8VFN3 311 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Cd209dQ91ZW8 237 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Chmp1b2Q9CQD4 199 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 OxsmQ9D404 459 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Rtl8cQ9D6I0 112 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Tex33Q9D9J2 266 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 SmpxQ9DC77 85 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Rarres2Q9DD06 162 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Ilf3Q9Z1X4 898 aaKnown RBP20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Gm19410A0A140LJC7 2098 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Ighv1-13A0A075B5I0 98 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Prr23a2D3YWX5 253 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Olfr199F6ZUS0 308 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Tcstv3O70518 169 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 SnrpbP27048 231 aaKnown RBP20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 AhrP30561 848 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Cdk5r1P61809 307 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Acta2P62737 377 aaKnown RBP20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Actg2P63268 376 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 HgsnatQ3UDW8 656 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Thsd4Q3UTY6 1018 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Amz2Q400C8 359 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Azgp1Q64726 307 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Olfr1463Q7TQR3 310 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Olfr524Q7TRU0 318 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 PhyhipQ8K0S0 330 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Hrh4Q91ZY2 391 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Cmtm3Q99LJ5 184 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Keg1Q9DCY0 295 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 FryE9Q8I9 3020 aa20.18■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Gm20219A0A1B0GRQ3 87 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 A0A1L1SR50 188 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Vmn2r48E9Q5D8 855 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Gm6465F7A7Y6 181 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Gm8906L7N2A2 181 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Brd7O88665 651 aaKnown RBP20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Klf2Q60843 354 aaKnown RBP20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Olfr5Q60889 312 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Tmem127Q8BGP5 238 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Arf2Q8BSL7 181 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 SrrdQ8K2M3 249 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Plcz1Q8K4D7 647 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 LgalslQ8VED9 172 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Nup37Q9CWU9 326 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Mrpl39Q9JKF7 336 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Itpr1P11881 2749 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Trav6-7-dv9A0A075B639 125 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Olfr1018A2ASV3 311 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Gm6034E9Q101 117 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Gm19684G3UZ45 117 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Gm2035J3QP87 144 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Acyp2P56375 106 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Rnf166Q3U9F6 237 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Sntb2Q61235 520 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 B430306N03RikQ6QX36 289 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 HeltQ7TS99 240 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Rasgef1bQ8JZL7 473 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Cacnb4Q8R0S4 519 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Ccdc115Q8VE99 180 aaKnown RBP20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Slc39a8Q91W10 462 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 D6Wsu163eQ91YN0 552 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Sf3b5Q923D4 86 aaKnown RBP20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Olfr888Q9EQA5 314 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Sec61a2Q9JLR1 476 aa20.17■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Heatr5aQ5PRF0 2038 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Rpl7a-ps5A0A140T8L3 268 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Samt3A2ARK7 233 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Gm6803J3QPI8 144 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Olfr597L7N224 315 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Gm20939L7N243 523 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Vmn2r60L7N2A1 853 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 NgfP01139 241 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 RrasP10833 218 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 GnrhrQ01776 327 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Mtcp1Q60945 107 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Cmtm4Q8CJ61 208 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Or51e2Q8VBV9 320 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Exosc5Q9CRA8 235 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Adh4Q9QYY9 377 aa20.16■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Vmn2r113E9PZA6 856 aa20.15■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Rdh16f1E9Q9P8 317 aa20.15■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Casp16-psI6L890 176 aa20.15■□□□□ 0.82
Upf3a-201ENSMUST00000043767 Cpt2P52825 658 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 66 ms