RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 RGCCQ9H4X1 137 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 ZNF556Q9HAH1 456 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 SNTG1Q9NSN8 517 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 LRP12Q9Y561 859 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 WIPF1O43516 503 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 HMGN1P05114 100 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 SELLP14151 372 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 AMY2BP19961 511 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 SLC2A5P22732 501 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 PSMA6P60900 246 aaKnown RBP11.48□□□□□ -0.57
LINC00339-211ENST00000641009 RPS7P62081 194 aaKnown RBP11.48□□□□□ -0.57
LINC00339-211ENST00000641009 IL5RAQ01344 420 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 IKZF1Q13422 519 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 CDONQ4KMG0 1287 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 KCTD8Q6ZWB6 473 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 VMO1Q7Z5L0 202 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 OR8B12Q8NGG6 310 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 OR5P3Q8WZ94 311 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 PIGCQ92535 297 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 FAM71F1Q96KD3 344 aaPredicted RBP11.48□□□□□ -0.57
LINC00339-211ENST00000641009 PKP2Q99959 881 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 RTL8AQ9BWD3 113 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 WDR13Q9H1Z4 485 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 CNTD2Q9H8S5 307 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 MPC1Q9Y5U8 109 aa11.48□□□□□ -0.57
LINC00339-211ENST00000641009 A0A0U1RQK1 487 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 PSMD9O00233 223 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 FKBP6O75344 327 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 CST4P01036 141 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 TFF1P04155 84 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 CRYBA1P05813 215 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 CBX1P83916 185 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 RELBQ01201 579 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 PRB3Q04118 309 aaPredicted RBP11.47□□□□□ -0.57
LINC00339-211ENST00000641009 SRSF4Q08170 494 aaKnown RBP11.47□□□□□ -0.57
LINC00339-211ENST00000641009 APOFQ13790 326 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 FLOT2Q14254 428 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 SNCBQ16143 134 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 C11orf91Q3C1V1 193 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 SLC35D3Q5M8T2 416 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 STUMQ69YW2 141 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 SLC36A1Q7Z2H8 476 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 KRT77Q7Z794 578 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 KIR3DL3Q8N743 410 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 SCCPDHQ8NBX0 429 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 LY6G5BQ8NDX9 201 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 HPSE2Q8WWQ2 592 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 C12orf43Q96C57 262 aaKnown RBP11.47□□□□□ -0.57
LINC00339-211ENST00000641009 SLITRK2Q9H156 845 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 HAO2Q9NYQ3 351 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 C1RLQ9NZP8 487 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 ONECUT1Q9UBC0 465 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 LAMP5Q9UJQ1 280 aa11.47□□□□□ -0.57
LINC00339-211ENST00000641009 TMEM210A6NLX4 147 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 GYG2O15488 501 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 AKR7A2O43488 359 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 NDUFB3O43676 98 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 TGP01266 2768 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 MRPL3P09001 348 aaKnown RBP11.46□□□□□ -0.57
LINC00339-211ENST00000641009 ANXA8P13928 327 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 ALOX5APP20292 161 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 RAG2P55895 527 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 DLX1P56177 255 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 TRPM8Q7Z2W7 1104 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 ZDHHC23Q8IYP9 409 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 TMEM86BQ8N661 226 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 SSMEM1Q8WWF3 244 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 RNF170Q96K19 258 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 SLC25A19Q9HC21 320 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 TVP23BQ9NYZ1 205 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 DNAJB9Q9UBS3 223 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 DNAJB11Q9UBS4 358 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 MMP24Q9Y5R2 645 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 KPTNQ9Y664 436 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 POMT1Q9Y6A1 747 aa11.46□□□□□ -0.57
LINC00339-211ENST00000641009 NOTCH1P46531 2555 aa11.46□□□□□ -0.58
LINC00339-211ENST00000641009 A0A1B0GVI7 797 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 TCRBV3S1A0A5B6 114 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 KNG1P01042 644 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 IGHV4-59P01825 116 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 HOXB6P17509 224 aaKnown RBP11.45□□□□□ -0.58
LINC00339-211ENST00000641009 DCTDP32321 178 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 TGM4P49221 684 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 GPM6AP51674 278 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 SNAPC1Q16533 368 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 DNAL1Q4LDG9 190 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 LRRC10Q5BKY1 277 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 FAM76BQ5HYJ3 339 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 DMRTC1Q5HYR2 192 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 CEP78Q5JTW2 689 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 OR10Z1Q8NGY1 313 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 OR4F5Q8NH21 305 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 FAM81AQ8TBF8 368 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 WFDC12Q8WWY7 111 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 H1FXQ92522 213 aaKnown RBP11.45□□□□□ -0.58
LINC00339-211ENST00000641009 RAB3IPQ96QF0 476 aaPredicted RBP11.45□□□□□ -0.58
LINC00339-211ENST00000641009 TTTY10Q9BZA0 68 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 SEMA6AQ9H2E6 1030 aa11.45□□□□□ -0.58
LINC00339-211ENST00000641009 NIPAL2Q9H841 368 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms