RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 KIRREL1Q96J84 757 aa9.63□□□□□ -0.87
SNIP1-204ENST00000638725 URM1Q9BTM9 101 aaKnown RBP9.63□□□□□ -0.87
SNIP1-204ENST00000638725 MRPL13Q9BYD1 178 aaKnown RBP9.63□□□□□ -0.87
SNIP1-204ENST00000638725 SMIM3Q9BZL3 60 aa9.63□□□□□ -0.87
SNIP1-204ENST00000638725 OR10A2Q9H208 303 aa9.63□□□□□ -0.87
SNIP1-204ENST00000638725 ASH2LQ9UBL3 628 aa9.63□□□□□ -0.87
SNIP1-204ENST00000638725 B3GALT5Q9Y2C3 310 aa9.63□□□□□ -0.87
SNIP1-204ENST00000638725 C5orf63A6NC05 138 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 ARL4DP49703 201 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 CLRN1P58418 232 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 RAB5BP61020 215 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 EIF5AP63241 154 aaKnown RBP9.62□□□□□ -0.87
SNIP1-204ENST00000638725 RNF4P78317 190 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 IAH1Q2TAA2 248 aaPredicted RBP9.62□□□□□ -0.87
SNIP1-204ENST00000638725 TMEM268Q5VZI3 342 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 EIF5AL1Q6IS14 154 aaKnown RBP9.62□□□□□ -0.87
SNIP1-204ENST00000638725 FAM57BQ71RH2 274 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 GKN2Q86XP6 184 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 NANPQ8TBE9 248 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 SECTM1Q8WVN6 248 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 ZDHHC12Q96GR4 267 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 RNF122Q9H9V4 155 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 UCK1Q9HA47 277 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 FANCFQ9NPI8 374 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 FBXL17Q9UF56 701 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 EDARQ9UNE0 448 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 METTL12A8MUP2 240 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 TAAR5O14804 337 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 HPNP05981 417 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 CPT2P23786 658 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 RPL12P30050 165 aaKnown RBP9.62□□□□□ -0.87
SNIP1-204ENST00000638725 RBMS3Q6XE24 437 aaKnown RBP9.62□□□□□ -0.87
SNIP1-204ENST00000638725 SLC16A13Q7RTY0 426 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 CNTNAP3Q9BZ76 1288 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 NKX2-4Q9H2Z4 354 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 MOB1AQ9H8S9 216 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 SMCO4Q9NRQ5 59 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 ALKBH4Q9NXW9 302 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 RPH3AQ9Y2J0 694 aaPredicted RBP9.62□□□□□ -0.87
SNIP1-204ENST00000638725 FER1L5A0AVI2 2057 aa9.62□□□□□ -0.87
SNIP1-204ENST00000638725 VSTM2BA6NLU5 285 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 FIGNL2A6NMB9 653 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 E9PLN8 166 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 CST4P01036 141 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 FOLR1P15328 257 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 FOSL2P15408 326 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 ADH6P28332 368 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 BLVRBP30043 206 aaPredicted RBP9.61□□□□□ -0.87
SNIP1-204ENST00000638725 PPT1P50897 306 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 ACY1Q03154 408 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 C17orf67Q0P5P2 114 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 TGIF1Q15583 401 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 ZNF283Q8N7M2 679 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 NOXO1Q8NFA2 376 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 RHBDD1Q8TEB9 315 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 EMG1Q92979 244 aaKnown RBP9.61□□□□□ -0.87
SNIP1-204ENST00000638725 HIST1H2BAQ96A08 127 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 LIN37Q96GY3 246 aaPredicted RBP9.61□□□□□ -0.87
SNIP1-204ENST00000638725 TPSD1Q9BZJ3 242 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 CHRNA10Q9GZZ6 450 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 PARP11Q9NR21 331 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 CACFD1Q9UGQ2 172 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 MEMO1Q9Y316 297 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 IGKV1D-8A0A087WSZ0 117 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 K7EPK0 472 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 PGA4P0DJD7 388 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 PGA3P0DJD8 388 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 FOLR2P14207 255 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 NME1P15531 152 aaKnown RBP9.61□□□□□ -0.87
SNIP1-204ENST00000638725 SERPINA2P20848 420 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 PTAFRP25105 342 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 FCGR2CP31995 323 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 RBMXP38159 391 aaKnown RBP9.61□□□□□ -0.87
SNIP1-204ENST00000638725 DVL1P1P54792 670 aaPredicted RBP9.61□□□□□ -0.87
SNIP1-204ENST00000638725 OR1D5P58170 312 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 TAS2R46P59540 309 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 GABREP78334 506 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 MYBPHQ13203 477 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 THEM4Q5T1C6 240 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 FBXO46Q6PJ61 603 aaPredicted RBP9.61□□□□□ -0.87
SNIP1-204ENST00000638725 CLEC9AQ6UXN8 241 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 FAM71E2Q8N5Q1 922 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 SSC4DQ8WTU2 575 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 FBXO17Q96EF6 278 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 NAA11Q9BSU3 229 aaPredicted RBP9.61□□□□□ -0.87
SNIP1-204ENST00000638725 PECRQ9BY49 303 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 PNRC2Q9NPJ4 139 aaKnown RBP9.61□□□□□ -0.87
SNIP1-204ENST00000638725 RPS10P5Q9NQ39 176 aa9.61□□□□□ -0.87
SNIP1-204ENST00000638725 ZNF701Q9NV72 531 aaPredicted RBP9.61□□□□□ -0.87
SNIP1-204ENST00000638725 LSM5Q9Y4Y9 91 aaKnown RBP9.61□□□□□ -0.87
SNIP1-204ENST00000638725 RHPN2P1A8MT19 583 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 HGFACQ04756 655 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 ECH1Q13011 328 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 CHRFAM7AQ494W8 412 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 LCN10Q6JVE6 187 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 CRIP3Q6Q6R5 217 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 UEVLDQ8IX04 471 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 FAM89BQ8N5H3 189 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 C15orf54Q8N8G6 183 aa9.6□□□□□ -0.87
SNIP1-204ENST00000638725 OR5B2Q96R09 309 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms