RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 CLVS2Q5SYC1 327 aa16.45■□□□□ 0.22
HLA-A-209ENST00000638375 OR5P3Q8WZ94 311 aa16.45■□□□□ 0.22
HLA-A-209ENST00000638375 C10orf35Q96D05 121 aa16.45■□□□□ 0.22
HLA-A-209ENST00000638375 CHST5Q9GZS9 411 aa16.45■□□□□ 0.22
HLA-A-209ENST00000638375 SAP30LQ9HAJ7 183 aa16.45■□□□□ 0.22
HLA-A-209ENST00000638375 CSMD1Q96PZ7 3565 aa16.45■□□□□ 0.22
HLA-A-209ENST00000638375 ANKRD17O75179 2603 aaKnown RBP16.45■□□□□ 0.22
HLA-A-209ENST00000638375 IGHV3-64DA0A0J9YX35 117 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 LOC100289279A0A1B0GTE1 492 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 ANKRD61A6NGH8 418 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 TRIM64CA6NLI5 447 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 ANXA2P2A6NMY6 339 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 TPD52L2O43399 206 aaKnown RBP16.44■□□□□ 0.22
HLA-A-209ENST00000638375 SSX4O60224 188 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 NRASP01111 189 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 CPEP16870 476 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 HNRNPA0Q13151 305 aaKnown RBP16.44■□□□□ 0.22
HLA-A-209ENST00000638375 SSX1Q16384 188 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 ARMCX4Q5H9R4 360 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 PLCXD3Q63HM9 321 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 KCTD8Q6ZWB6 473 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 MOB3CQ70IA8 216 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 WDR86Q86TI4 376 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 PHC2Q8IXK0 858 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 SPERTQ8NA61 448 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 OR8S1Q8NH09 359 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 FCGR1BQ92637 280 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 YIPF5Q969M3 257 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 EGLN1Q9GZT9 426 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 CXXC4Q9H2H0 198 aa16.44■□□□□ 0.22
HLA-A-209ENST00000638375 BARX1Q9HBU1 254 aaPredicted RBP16.44■□□□□ 0.22
HLA-A-209ENST00000638375 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.43■□□□□ 0.22
HLA-A-209ENST00000638375 LYNX1G3V0Z9 82 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 PTBP3O95758 552 aaKnown RBP16.43■□□□□ 0.22
HLA-A-209ENST00000638375 OCM2P0CE71 109 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 SMIM18P0DKX4 95 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 LYNX1P0DP58 116 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 DAOP14920 347 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 ZNF20P17024 532 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 COL8A2P25067 703 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 PSMB9P28065 219 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 THBS2P35442 1172 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 RBMXP38159 391 aaKnown RBP16.43■□□□□ 0.22
HLA-A-209ENST00000638375 SRP9P49458 86 aaKnown RBP16.43■□□□□ 0.22
HLA-A-209ENST00000638375 UBE2V2Q15819 145 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 NEDD8Q15843 81 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 Q499Y3 187 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 PRAMEF6Q5VXH4 476 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 ASPHD2Q6ICH7 369 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 TGIF2LYQ8IUE0 185 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 KRTAP1-3Q8IUG1 177 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 CELF2-AS1Q8N7Q2 184 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 PP6455Q8WZ26 134 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 FOXC2Q99958 501 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 TMED9Q9BVK6 235 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 ABCB9Q9NP78 766 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 SF3B6Q9Y3B4 125 aaKnown RBP16.43■□□□□ 0.22
HLA-A-209ENST00000638375 CACNG2Q9Y698 323 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 NOTCH2Q04721 2471 aa16.43■□□□□ 0.22
HLA-A-209ENST00000638375 ARID1AO14497 2285 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 CDC14BO60729 498 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 TNFRSF1AP19438 455 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 GATA4P43694 442 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 RPS25P62851 125 aaKnown RBP16.42■□□□□ 0.22
HLA-A-209ENST00000638375 INSL4Q14641 139 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 CEACAM21Q3KPI0 293 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 UTS2BQ765I0 119 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 PARP16Q8N5Y8 322 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 ZNF525Q8N782 197 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 RDH5Q92781 318 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 MUL1Q969V5 352 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 TMEM106AQ96A25 262 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 ORAI1Q96D31 301 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 RNF170Q96K19 258 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 OR14A2Q96R54 314 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 MICU1Q9BPX6 476 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 RTL8AQ9BWD3 113 aa16.42■□□□□ 0.22
HLA-A-209ENST00000638375 SETXQ7Z333 2677 aaKnown RBP16.41■□□□□ 0.22
HLA-A-209ENST00000638375 IGKV1-9A0A0C4DH69 117 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 IGHV1-69-2A0A0G2JMI3 117 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 GATBO75879 557 aaKnown RBP16.41■□□□□ 0.22
HLA-A-209ENST00000638375 PMELP40967 661 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 CRYBB2P43320 205 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 GPM6AP51674 278 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 ART1P52961 327 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 GP2P55259 537 aaKnown RBP16.41■□□□□ 0.22
HLA-A-209ENST00000638375 MPPED2Q15777 294 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 Q5PR19 223 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 SYT6Q5T7P8 510 aaPredicted RBP16.41■□□□□ 0.22
HLA-A-209ENST00000638375 DNM1P46Q6ZS02 220 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 MS4A15Q8N5U1 240 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 OR1M1Q8NGA1 313 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 OR5A2Q8NGI9 324 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 OR13C9Q8NGT0 318 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 TMEM203Q969S6 136 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 HIST1H2AAQ96QV6 131 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 GCM1Q9NP62 436 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 C14orf119Q9NWQ9 140 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 DCAF16Q9NXF7 216 aa16.41■□□□□ 0.22
HLA-A-209ENST00000638375 TREM2Q9NZC2 230 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms