RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 LY6HO94772 140 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 HPXP02790 462 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 ZNF20P17024 532 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 CD200P41217 278 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 GPR50Q13585 617 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 TESK1Q15569 626 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 ZDHHC23Q8IYP9 409 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 SPERTQ8NA61 448 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 TSEN15Q8WW01 171 aaKnown RBP13.57□□□□□ -0.24
CLN6-216ENST00000636876 ITLN1Q8WWA0 313 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 UFD1Q92890 307 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 FGGYQ96C11 551 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 ADAT3Q96EY9 351 aaPredicted RBP13.57□□□□□ -0.24
CLN6-216ENST00000636876 MEGF10Q96KG7 1140 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 OR2V2Q96R30 315 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 CXXC4Q9H2H0 198 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 SAP30LQ9HAJ7 183 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 IL19Q9UHD0 177 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 DHDHQ9UQ10 334 aa13.57□□□□□ -0.24
CLN6-216ENST00000636876 TRBV5-5A0A0J9YX44 114 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 ANXA2P2A6NMY6 339 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 NRASP01111 189 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 CPEP16870 476 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 SRP9P49458 86 aaKnown RBP13.56□□□□□ -0.24
CLN6-216ENST00000636876 RPS11P62280 158 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLN6-216ENST00000636876 SPRNQ5BIV9 151 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 YIF1BQ5BJH7 314 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 LIPKQ5VXJ0 399 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 CELF2-AS1Q8N7Q2 184 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 OR13C5Q8NGS8 318 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 OR8S1Q8NH09 359 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 PP6455Q8WZ26 134 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 OR5P3Q8WZ94 311 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 ITPKCQ96DU7 683 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 FOXC2Q99958 501 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 MICU1Q9BPX6 476 aa13.56□□□□□ -0.24
CLN6-216ENST00000636876 ANKRD61A6NGH8 418 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 TRIM64CA6NLI5 447 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 SSX4O60224 188 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 DAOP14920 347 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 TNFRSF1AP19438 455 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 SOX2P48431 317 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 MRPS11P82912 194 aaKnown RBP13.55□□□□□ -0.24
CLN6-216ENST00000636876 MZT1Q08AG7 82 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 MAB21L1Q13394 359 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 ARMCX4Q5H9R4 360 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 CEP78Q5JTW2 689 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 PLCXD3Q63HM9 321 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 KCTD8Q6ZWB6 473 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 MOB3CQ70IA8 216 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 MS4A15Q8N5U1 240 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 HPSE2Q8WWQ2 592 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 RDH5Q92781 318 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 HIST1H2AAQ96QV6 131 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 RTL8AQ9BWD3 113 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 CHST5Q9GZS9 411 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 FGF23Q9GZV9 251 aaPredicted RBP13.55□□□□□ -0.24
CLN6-216ENST00000636876 GPR173Q9NS66 373 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 C14orf119Q9NWQ9 140 aa13.55□□□□□ -0.24
CLN6-216ENST00000636876 PRRC2AP48634 2157 aaKnown RBP13.55□□□□□ -0.24
CLN6-216ENST00000636876 IGHV1-69-2A0A0G2JMI3 117 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 LOC100289279A0A1B0GTE1 492 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 GATBO75879 557 aaKnown RBP13.54□□□□□ -0.24
CLN6-216ENST00000636876 INMTO95050 263 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 PTBP3O95758 552 aaKnown RBP13.54□□□□□ -0.24
CLN6-216ENST00000636876 SERPINA3P01011 423 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 CD2P06729 351 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 OCM2P0CE71 109 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 PSMB9P28065 219 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 CRYBB2P43320 205 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 GATA4P43694 442 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 NEDD8Q15843 81 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 CEACAM21Q3KPI0 293 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 Q499Y3 187 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 UTS2BQ765I0 119 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 PHC2Q8IXK0 858 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 PARP16Q8N5Y8 322 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 OR5A2Q8NGI9 324 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 RNF170Q96K19 258 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 TMED9Q9BVK6 235 aa13.54□□□□□ -0.24
CLN6-216ENST00000636876 MYOZ1Q9NP98 299 aaPredicted RBP13.54□□□□□ -0.24
CLN6-216ENST00000636876 SETD2Q9BYW2 2564 aaPredicted RBP13.54□□□□□ -0.24
CLN6-216ENST00000636876 IGHV3-64DA0A0J9YX35 117 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 OR5B21A6NL26 309 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 LYNX1G3V0Z9 82 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 CDC14BO60729 498 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 LYNX1P0DP58 116 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 COL8A2P25067 703 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 THBS2P35442 1172 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 ART1P52961 327 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 GNG3P63215 75 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 UBE2V2Q15819 145 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 SSX1Q16384 188 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 DMRTC1Q5HYR2 192 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 PRAMEF6Q5VXH4 476 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 PRSS57Q6UWY2 283 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 WDR86Q86TI4 376 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 ZNF525Q8N782 197 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 YIPF5Q969M3 257 aa13.53□□□□□ -0.24
CLN6-216ENST00000636876 MUL1Q969V5 352 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms