RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 TNFRSF13BO14836 293 aaPredicted RBP14.84□□□□□ -0.03
PNKP-225ENST00000636214 IKZF1Q13422 519 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 APOFQ13790 326 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 WDR38Q5JTN6 314 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 THAP5Q7Z6K1 395 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 WDR86Q86TI4 376 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 OR8B12Q8NGG6 310 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 OR10Z1Q8NGY1 313 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 TMIGD2Q96BF3 282 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 NRBF2Q96F24 287 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 RNF170Q96K19 258 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 TBX15Q96SF7 602 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 PKP2Q99959 881 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 YIPF3Q9GZM5 350 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 CNTD2Q9H8S5 307 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 ZNF319Q9P2F9 582 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 RPUSD1Q9UJJ7 312 aaKnown RBP14.84□□□□□ -0.03
PNKP-225ENST00000636214 TMEM14AQ9Y6G1 99 aa14.84□□□□□ -0.03
PNKP-225ENST00000636214 ZNF816-ZNF321PA0A0X1KG74 233 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 TCRBV3S1A0A5B6 114 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 GPR37O15354 613 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 CST4P01036 141 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 MMP9P14780 707 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 MAP2K3P46734 347 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 CRISP1P54107 249 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 ZNF829Q3KNS6 432 aaPredicted RBP14.83□□□□□ -0.04
PNKP-225ENST00000636214 TMEM236Q5W0B7 351 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 Q6YL49 198 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 C11orf53Q8IXP5 236 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 TMEM86BQ8N661 226 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 TBC1D15Q8TC07 691 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 SSMEM1Q8WWF3 244 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 RPL3LQ92901 407 aaKnown RBP14.83□□□□□ -0.04
PNKP-225ENST00000636214 SIRPDQ9H106 197 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 TLNRD1Q9H1K6 362 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 ACOXLQ9NUZ1 547 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 HAO2Q9NYQ3 351 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 H2AFY2Q9P0M6 372 aaPredicted RBP14.83□□□□□ -0.04
PNKP-225ENST00000636214 IKZF2Q9UKS7 526 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 POMPQ9Y244 141 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 KPTNQ9Y664 436 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 POMT1Q9Y6A1 747 aa14.83□□□□□ -0.04
PNKP-225ENST00000636214 IGHV1-69DA0A0B4J2H0 117 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 CENPVL3A0A0U1RRI6 287 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 A0A1B0GUS0 222 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 A0A1B0GVI7 797 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 TMEM269A0A1B0GVZ9 245 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 ACOD1A6NK06 481 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 GSC2O15499 205 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 IGHV1-69P01742 117 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 MRPL3P09001 348 aaKnown RBP14.82□□□□□ -0.04
PNKP-225ENST00000636214 ALOX5APP20292 161 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 ACKR3P25106 362 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 CDONQ4KMG0 1287 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 DEGS2Q6QHC5 323 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 FIP1L1Q6UN15 594 aaKnown RBP14.82□□□□□ -0.04
PNKP-225ENST00000636214 FAM216BQ8N7L0 139 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 OR4F5Q8NH21 305 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 ASB17Q8WXJ9 295 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 OR5P3Q8WZ94 311 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 H1FXQ92522 213 aaKnown RBP14.82□□□□□ -0.04
PNKP-225ENST00000636214 ITFG2Q969R8 447 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 MED30Q96HR3 178 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 DNTTIP1Q9H147 329 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 PRDM13Q9H4Q3 707 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 BEX1Q9HBH7 125 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 KLHDC2Q9Y2U9 406 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 CAB39Q9Y376 341 aaPredicted RBP14.82□□□□□ -0.04
PNKP-225ENST00000636214 FAM96BQ9Y3D0 163 aa14.82□□□□□ -0.04
PNKP-225ENST00000636214 FAM181BA6NEQ2 426 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 AKR7A2O43488 359 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 MELTFP08582 738 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 SLC2A5P22732 501 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 OMGP23515 440 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 EEF1B2P24534 225 aaKnown RBP14.81□□□□□ -0.04
PNKP-225ENST00000636214 GPM6AP51674 278 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 RIDAP52758 137 aaKnown RBP14.81□□□□□ -0.04
PNKP-225ENST00000636214 ACTR3P61158 418 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 VMO1Q7Z5L0 202 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 PDZD9Q8IXQ8 264 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 OR5T2Q8NGG2 359 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 OR5K1Q8NHB7 308 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 LYZL4Q96KX0 146 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 CNN2Q99439 309 aaKnown RBP14.81□□□□□ -0.04
PNKP-225ENST00000636214 PPP1R3EQ9H7J1 279 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 SNTG1Q9NSN8 517 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 GTF2A1LQ9UNN4 478 aa14.81□□□□□ -0.04
PNKP-225ENST00000636214 A0A0U1RQV5 110 aa14.8□□□□□ -0.04
PNKP-225ENST00000636214 BTBD17A6NE02 478 aa14.8□□□□□ -0.04
PNKP-225ENST00000636214 ZNF254O75437 659 aa14.8□□□□□ -0.04
PNKP-225ENST00000636214 KNG1P01042 644 aa14.8□□□□□ -0.04
PNKP-225ENST00000636214 ATP6V1B1P15313 513 aa14.8□□□□□ -0.04
PNKP-225ENST00000636214 MDKP21741 143 aaPredicted RBP14.8□□□□□ -0.04
PNKP-225ENST00000636214 GLRA1P23415 457 aa14.8□□□□□ -0.04
PNKP-225ENST00000636214 HCCSP53701 268 aa14.8□□□□□ -0.04
PNKP-225ENST00000636214 RAG2P55895 527 aa14.8□□□□□ -0.04
PNKP-225ENST00000636214 ESRRGP62508 458 aa14.8□□□□□ -0.04
PNKP-225ENST00000636214 GNG3P63215 75 aa14.8□□□□□ -0.04
PNKP-225ENST00000636214 GUCA2AQ02747 115 aa14.8□□□□□ -0.04
PNKP-225ENST00000636214 STUMQ69YW2 141 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms