RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, human

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00339-206	ENST00000634451	SP140L	Q9H930	580 aa		10.46	□□□□□ -0.73
LINC00339-206	ENST00000634451	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.46	□□□□□ -0.73
LINC00339-206	ENST00000634451	C19orf12	Q9NSK7	152 aa		10.46	□□□□□ -0.73
LINC00339-206	ENST00000634451	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.46	□□□□□ -0.73
LINC00339-206	ENST00000634451	AP3M1	Q9Y2T2	418 aa		10.46	□□□□□ -0.73
LINC00339-206	ENST00000634451	CAB39	Q9Y376	341 aa	Predicted RBP	10.46	□□□□□ -0.73
LINC00339-206	ENST00000634451	MAB21L2	Q9Y586	359 aa		10.46	□□□□□ -0.73
LINC00339-206	ENST00000634451	CDH10	Q9Y6N8	788 aa		10.46	□□□□□ -0.73
LINC00339-206	ENST00000634451	IGKV1D-17	A0A075B6S4	117 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451		A0A1W2PQ09	198 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	ZNF850	A8MQ14	1090 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	ZNF878	C9JN71	531 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	XRCC2	O43543	280 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	SOX14	O95416	240 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	JUNB	P17275	347 aa	Predicted RBP	10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	SPI1	P17947	270 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	KIR2DS4	P43632	304 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	UBE2E1	P51965	193 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	TSPAN31	Q12999	210 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	EIF2B1	Q14232	305 aa	Known RBP	10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	TMEM95	Q3KNT9	176 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	ATPAF1	Q5TC12	328 aa	Predicted RBP	10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	LINC01590	Q5TEZ4	76 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451		Q6ZS46	218 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	HDX	Q7Z353	690 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	LHFPL4	Q7Z7J7	247 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	MKX	Q8IYA7	352 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	OR6K6	Q8NGW6	343 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	OR2T4	Q8NH00	348 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	GNPDA2	Q8TDQ7	276 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	NPRL2	Q8WTW4	380 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	PHF21A	Q96BD5	680 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	PYURF	Q96I23	114 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	NKX3-1	Q99801	234 aa	Predicted RBP	10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	NMNAT2	Q9BZQ4	307 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	ZNF702P	Q9H963	129 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	SERTAD4	Q9NUC0	356 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	ARMC1	Q9NVT9	282 aa		10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	SAMD4A	Q9UPU9	718 aa	Known RBP	10.45	□□□□□ -0.74
LINC00339-206	ENST00000634451	MEX3A	A1L020	520 aa	Known RBP	10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	FAM183A	A6NL82	134 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	SLC22A2	O15244	555 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	SIGLEC5	O15389	551 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	IDH3B	O43837	385 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	COX7A1	P24310	79 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	DCTD	P32321	178 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	GRK5	P34947	590 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	CEBPD	P49716	269 aa	Predicted RBP	10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	RAB13	P51153	203 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	LOXL3	P58215	753 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	PRDX4	Q13162	271 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	LRRC75B	Q2VPJ9	315 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	C11orf91	Q3C1V1	193 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	HACD2	Q6Y1H2	254 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	FAM185A	Q8N0U4	392 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	OR51G2	Q8NGK0	314 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	OR4C13	Q8NGP0	309 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	C12orf43	Q96C57	262 aa	Known RBP	10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	OR5M11	Q96RB7	305 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	ABHD6	Q9BV23	337 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	METTL8	Q9H825	291 aa	Known RBP	10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	EFCAB1	Q9HAE3	211 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	VNN3	Q9NY84	501 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	ZNF222	Q9UK12	451 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	KLHDC2	Q9Y2U9	406 aa		10.44	□□□□□ -0.74
LINC00339-206	ENST00000634451	NKX6-3	A6NJ46	265 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451		M0R1W7	72 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	GAST	P01350	101 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	H2AFX	P16104	143 aa	Predicted RBP	10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	CCL3L1	P16619	93 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	POU1F1	P28069	291 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	FMO3	P31513	532 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	DDOST	P39656	456 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	GABRA2	P47869	451 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	MZT1	Q08AG7	82 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	LDLRAD2	Q5SZI1	272 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	ZNF770	Q6IQ21	691 aa	Predicted RBP	10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	KCTD8	Q6ZWB6	473 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	TMEM219	Q86XT9	240 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	BATF2	Q8N1L9	274 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	C11orf42	Q8N5U0	333 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	IQCF1	Q8N6M8	205 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	TMEM185A	Q8NFB2	350 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	OR6N2	Q8NGY6	317 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	OR2T6	Q8NHC8	308 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	OR5P3	Q8WZ94	311 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	SGCD	Q92629	289 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	CLPTM1L	Q96KA5	538 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	ZNF488	Q96MN9	340 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	CITED2	Q99967	270 aa	Predicted RBP	10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	TSSK6	Q9BXA6	273 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	YY1AP1	Q9H869	796 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	TBC1D23	Q9NUY8	699 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	MRGBP	Q9NV56	204 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	NLK	Q9UBE8	527 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	COL7A1	Q02388	2944 aa		10.43	□□□□□ -0.74
LINC00339-206	ENST00000634451	OR2AT4	A6NND4	320 aa		10.42	□□□□□ -0.74
LINC00339-206	ENST00000634451		H0YAE9	185 aa		10.42	□□□□□ -0.74
LINC00339-206	ENST00000634451	ARPC2	O15144	300 aa		10.42	□□□□□ -0.74

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