RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 KRT72Q14CN4 511 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 KCTD8Q6ZWB6 473 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 ARPINQ7Z6K5 226 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 CPLX4Q7Z7G2 160 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 SLC15A3Q8IY34 581 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 CYB561A3Q8NBI2 242 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 TMEM185AQ8NFB2 350 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 RPL3LQ92901 407 aaKnown RBP11.91□□□□□ -0.5
PNKP-218ENST00000625299 SPSB4Q96A44 273 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 MICU1Q9BPX6 476 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 DNTTIP1Q9H147 329 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 SAR1AQ9NR31 198 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 MRGBPQ9NV56 204 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 AP3M1Q9Y2T2 418 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 COMMD3-BMI1R4GMX3 469 aa11.91□□□□□ -0.5
PNKP-218ENST00000625299 MEGF11A6BM72 1044 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 ANXA2P2A6NMY6 339 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 SIGLEC5O15389 551 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 COX7A1P24310 79 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 HSD11B1P28845 292 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 AANATQ16613 207 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 MKXQ8IYA7 352 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 ANGPTL6Q8NI99 470 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 ZNRF4Q8WWF5 429 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 RTL8AQ9BWD3 113 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 TLNRD1Q9H1K6 362 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 DNAJC27Q9NZQ0 273 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 RHBDD3Q9Y3P4 386 aa11.9□□□□□ -0.5
PNKP-218ENST00000625299 hCG_38984A0A1B0GV85 526 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 ZNF878C9JN71 531 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 NME4O00746 187 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 ACAA1P09110 424 aaPredicted RBP11.89□□□□□ -0.51
PNKP-218ENST00000625299 PF4V1P10720 104 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 GSK3AP49840 483 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 CAPZA1P52907 286 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 LGALS4P56470 323 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 CAV3P56539 151 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 MXRA7P84157 204 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 IL5RAQ01344 420 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 SPIBQ01892 262 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 CD69Q07108 199 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 FAM57BQ71RH2 274 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 TMEM219Q86XT9 240 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 ZNRF1Q8ND25 227 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 OR10Z1Q8NGY1 313 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 OR2T4Q8NH00 348 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 PIFOQ8TCI5 191 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 SGK3Q96BR1 496 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 WWC2-AS2Q96NR7 200 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 DDOQ99489 341 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 BRD7Q9NPI1 651 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 NLKQ9UBE8 527 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 V9GYQ6 96 aa11.89□□□□□ -0.51
PNKP-218ENST00000625299 TRBV23-1A0A0A0MS06 115 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 WI2-2373I1.2A0A1W2PRP0 233 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 OR2AT4A6NND4 320 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 ZNF850A8MQ14 1090 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 IDH3BO43837 385 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 PAICSP22234 425 aaKnown RBP11.88□□□□□ -0.51
PNKP-218ENST00000625299 GLRA1P23415 457 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 MSX2P35548 267 aaPredicted RBP11.88□□□□□ -0.51
PNKP-218ENST00000625299 ENTPD1P49961 510 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 RAB13P51153 203 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 TMEM95Q3KNT9 176 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 LHFPL4Q7Z7J7 247 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 CSNK2A3Q8NEV1 391 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 KCTD14Q9BQ13 255 aaPredicted RBP11.88□□□□□ -0.51
PNKP-218ENST00000625299 FUZQ9BT04 418 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 CDCA4Q9BXL8 241 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 EGLN3Q9H6Z9 239 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 C19orf12Q9NSK7 152 aa11.88□□□□□ -0.51
PNKP-218ENST00000625299 ZNF593O00488 134 aaPredicted RBP11.87□□□□□ -0.51
PNKP-218ENST00000625299 GLCEO94923 617 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 GADD45GO95257 159 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 PF4P02776 101 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 GYPBP06028 91 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 FAHP16930 419 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 SLC15A1P46059 708 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 GRB2P62993 217 aaKnown RBP11.87□□□□□ -0.51
PNKP-218ENST00000625299 PRDX4Q13162 271 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 CNN3Q15417 329 aaKnown RBP11.87□□□□□ -0.51
PNKP-218ENST00000625299 KLHL12Q53G59 568 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 FTMTQ8N4E7 242 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 FAM86B1Q8N7N1 296 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 ZNF511Q8NB15 262 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 OR52L1Q8NGH7 329 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 OR6K6Q8NGW6 343 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 RNF170Q96K19 258 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 C7orf34Q96L11 122 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 DHRS1Q96LJ7 313 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 PRSS22Q9GZN4 317 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 HEXA-AS1Q9H8Q6 139 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 ABCB10Q9NRK6 738 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 TCF19Q9Y242 345 aa11.87□□□□□ -0.51
PNKP-218ENST00000625299 IGKV1D-17A0A075B6S4 117 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 DHRS12A0PJE2 317 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 TMEM210A6NLX4 147 aa11.86□□□□□ -0.51
PNKP-218ENST00000625299 CFL1P23528 166 aaKnown RBP11.86□□□□□ -0.51
PNKP-218ENST00000625299 FMO3P31513 532 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms