RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 LYPD6BQ8NI32 183 aa13.48□□□□□ -0.25
PMS1-221ENST00000624204 TOMM40LQ969M1 308 aa13.48□□□□□ -0.25
PMS1-221ENST00000624204 TMEM68Q96MH6 324 aa13.48□□□□□ -0.25
PMS1-221ENST00000624204 TIMM29Q9BSF4 260 aa13.48□□□□□ -0.25
PMS1-221ENST00000624204 LMF2Q9BU23 707 aaKnown RBP13.48□□□□□ -0.25
PMS1-221ENST00000624204 SCRT1Q9BWW7 348 aa13.48□□□□□ -0.25
PMS1-221ENST00000624204 COA3Q9Y2R0 106 aaPredicted RBP13.48□□□□□ -0.25
PMS1-221ENST00000624204 HS3ST3B1Q9Y662 390 aa13.48□□□□□ -0.25
PMS1-221ENST00000624204 H0YL77 283 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 H3BQ15 152 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 GAPDHP04406 335 aaKnown RBP13.47□□□□□ -0.25
PMS1-221ENST00000624204 TUBG1P23258 451 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 FPR2P25090 351 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 CPEB2Q7Z5Q1 589 aaKnown RBP13.47□□□□□ -0.25
PMS1-221ENST00000624204 OR13G1Q8NGZ3 307 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 PACRGQ96M98 296 aaPredicted RBP13.47□□□□□ -0.25
PMS1-221ENST00000624204 SOX7Q9BT81 388 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 UCK1Q9HA47 277 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 LYRM4Q9HD34 91 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 VPS13AQ96RL7 3174 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 A0A087WZY1 265 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 SMCO3A2RU48 225 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 PRSS37A4D1T9 235 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 HIDE1A8MVS5 230 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 ZNF878C9JN71 531 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 STMND1H3BQB6 276 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 CXCR1P25024 350 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 GABRA4P48169 554 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 ERVFRD-1P60508 538 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 DCXRQ7Z4W1 244 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 SLC22A24Q8N4F4 322 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 FAM160A2Q8N612 972 aaPredicted RBP13.47□□□□□ -0.25
PMS1-221ENST00000624204 OR10AD1Q8NGE0 317 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 OR52N5Q8NH56 324 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 GPR119Q8TDV5 335 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 FAM3CQ92520 227 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 PTX4Q96A99 478 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 ZNF524Q96C55 264 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 VSTM2LQ96N03 204 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 SLC5A6Q9Y289 635 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 B3GALT1Q9Y5Z6 326 aa13.47□□□□□ -0.25
PMS1-221ENST00000624204 GPR89AB7ZAQ6 455 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 GPR89BP0CG08 455 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 PPP1CAP62136 330 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 VITQ6UXI7 678 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 ZFYVE21Q9BQ24 234 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 RRAGCQ9HB90 399 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.46□□□□□ -0.25
PMS1-221ENST00000624204 C14orf166Q9Y224 244 aaKnown RBP13.46□□□□□ -0.25
PMS1-221ENST00000624204 R4GMQ9 66 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 C2orf72A6NCS6 295 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 IFNA21P01568 189 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 SLC35E2P0CK97 266 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 ZNF823P16415 610 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 PPM1AP35813 382 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 INSM1Q01101 510 aaPredicted RBP13.46□□□□□ -0.25
PMS1-221ENST00000624204 ELOBQ15370 118 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 RSPO4Q2I0M5 234 aaPredicted RBP13.46□□□□□ -0.25
PMS1-221ENST00000624204 PLXDC2Q6UX71 529 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 Q7L0L9 218 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 CA13Q8N1Q1 262 aa13.46□□□□□ -0.25
PMS1-221ENST00000624204 CDRT15L2A8MXV6 281 aa13.46□□□□□ -0.26
PMS1-221ENST00000624204 SCAF4O95104 1147 aaKnown RBP13.46□□□□□ -0.26
PMS1-221ENST00000624204 ZNF93P35789 620 aaPredicted RBP13.46□□□□□ -0.26
PMS1-221ENST00000624204 HIST2H3PS2Q5TEC6 136 aa13.46□□□□□ -0.26
PMS1-221ENST00000624204 GLIPR1L1Q6UWM5 242 aa13.46□□□□□ -0.26
PMS1-221ENST00000624204 SUMF1Q8NBK3 374 aa13.46□□□□□ -0.26
PMS1-221ENST00000624204 C8orf44Q96CB5 159 aa13.46□□□□□ -0.26
PMS1-221ENST00000624204 TM4SF19Q96DZ7 209 aa13.46□□□□□ -0.26
PMS1-221ENST00000624204 ADAT3Q96EY9 351 aaPredicted RBP13.46□□□□□ -0.26
PMS1-221ENST00000624204 WDR92Q96MX6 357 aa13.46□□□□□ -0.26
PMS1-221ENST00000624204 C1orf123Q9NWV4 160 aa13.46□□□□□ -0.26
PMS1-221ENST00000624204 ADAM10O14672 748 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 SYT7O43581 403 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 HCRTR2O43614 444 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 DEDDO75618 318 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 AHSA1O95433 338 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 ADH1CP00326 375 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 IFNA10P01566 189 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 CT45A8P0DMV1 189 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 CT45A9P0DMV2 189 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 DHPSP49366 369 aaPredicted RBP13.45□□□□□ -0.26
PMS1-221ENST00000624204 AFF3P51826 1226 aaKnown RBP13.45□□□□□ -0.26
PMS1-221ENST00000624204 BTG2P78543 158 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 SP3Q02447 781 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 FMODQ06828 376 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 CT45A2Q5DJT8 189 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 PLAC9Q5JTB6 97 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 GGNBP1Q5YKI7 109 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 BATF2Q8N1L9 274 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 TMEM156Q8N614 296 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 C16orf52Q8NHV5 167 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 ARHGAP5-AS1Q96IT6 56 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 B3GALT5Q9Y2C3 310 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 SLCO1B1Q9Y6L6 691 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 KIAA0100Q14667 2235 aaKnown RBP13.45□□□□□ -0.26
PMS1-221ENST00000624204 TRGC1P0CF51 173 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 DRD3P35462 400 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 PRSS12P56730 875 aa13.45□□□□□ -0.26
PMS1-221ENST00000624204 DLK1P80370 383 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms