RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ROM1Q03395 351 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 RFPL4BQ6ZWI9 263 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 RNF138Q8WVD3 245 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 FCAMRQ8WWV6 532 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 RDH5Q92781 318 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 SNRNP40Q96DI7 357 aaKnown RBP9.15□□□□□ -0.94
VPS11-208ENST00000621676 IP6K3Q96PC2 410 aa9.15□□□□□ -0.94
VPS11-208ENST00000621676 PHYHO14832 338 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 CTAG2O75638 210 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 HPNP05981 417 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 CEBPDP49716 269 aaPredicted RBP9.15□□□□□ -0.95
VPS11-208ENST00000621676 TSPAN5P62079 268 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 ATXN7L3Q14CW9 347 aaPredicted RBP9.15□□□□□ -0.95
VPS11-208ENST00000621676 HAGHLQ6PII5 290 aaPredicted RBP9.15□□□□□ -0.95
VPS11-208ENST00000621676 TMEM17Q86X19 198 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 CALHM1Q8IU99 346 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 FOXRED2Q8IWF2 684 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 DEFB108BQ8NET1 73 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 BORCS8Q96FH0 119 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 ARHGAP5-AS1Q96IT6 56 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 BCL7BQ9BQE9 202 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 NEURL2Q9BR09 285 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 NXF2Q9GZY0 626 aaKnown RBP9.15□□□□□ -0.95
VPS11-208ENST00000621676 SLC22A4Q9H015 551 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 FAIMQ9NVQ4 179 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 LHX6Q9UPM6 363 aa9.15□□□□□ -0.95
VPS11-208ENST00000621676 M0R1B8 84 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 KCNAB3O43448 404 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 VAMP1P23763 118 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 GSG1Q2KHT4 349 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 ZNF181Q2M3W8 571 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 FAM27BQ5VT28 67 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 TPRX1Q8N7U7 411 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 YIPF5Q969M3 257 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 SLAMF9Q96A28 289 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 FAAP24Q9BTP7 215 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 OR10A2Q9H208 303 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 PLSCR3Q9NRY6 295 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 EMC3Q9P0I2 261 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 EXPH5Q8NEV8 1989 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 A0A0B4J293 547 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 RBBP9O75884 186 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 IGHV1-2P23083 117 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 APLNRP35414 380 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 GK2Q14410 553 aaPredicted RBP9.14□□□□□ -0.95
VPS11-208ENST00000621676 FAM201AQ5SY85 155 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 FAM180AQ6UWF9 173 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 TPRA1Q86W33 373 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 WFDC8Q8IUA0 241 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 ZNF611Q8N823 705 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 SEMA6DQ8NFY4 1073 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 CCDC107Q8WV48 283 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 FOXJ3Q9UPW0 622 aa9.14□□□□□ -0.95
VPS11-208ENST00000621676 PCDHGA9Q9Y5G4 932 aaKnown RBP9.14□□□□□ -0.95
VPS11-208ENST00000621676 FAM90A27PA6NNH2 459 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 AMY2AP04746 511 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 SFTPBP07988 381 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 ETV6P41212 452 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 FXYD4P59646 89 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 SCRN3Q0VDG4 424 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 UNC119Q13432 240 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 RSU1Q15404 277 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 PCK2Q16822 640 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 FJX1Q86VR8 437 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 ZCCHC4Q9H5U6 513 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 RBFOX1Q9NWB1 397 aaKnown RBP9.13□□□□□ -0.95
VPS11-208ENST00000621676 ZNF224Q9NZL3 707 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 CACNG2Q9Y698 323 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 TRBV5-5A0A0J9YX44 114 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 NRASP01111 189 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 UBCP0CG48 685 aaKnown RBP9.13□□□□□ -0.95
VPS11-208ENST00000621676 PGAM2P15259 253 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 RPA2P15927 270 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 AKR1C4P17516 323 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 PRSS3P35030 304 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 MRPS34P82930 218 aaKnown RBP9.13□□□□□ -0.95
VPS11-208ENST00000621676 MRPL28Q13084 256 aaKnown RBP9.13□□□□□ -0.95
VPS11-208ENST00000621676 FAM205BPQ63HN1 556 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 C11orf88Q6PI97 169 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 FBXL14Q8N1E6 418 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 OR51F2Q8NH61 342 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 PPP1R14BQ96C90 147 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 SYT3Q9BQG1 590 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 MED18Q9BUE0 208 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 OBP2BQ9NPH6 170 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 ZNF69Q9UC07 566 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 ALG5Q9Y673 324 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 FLNBO75369 2602 aaKnown RBP9.13□□□□□ -0.95
VPS11-208ENST00000621676 DOPEY2Q9Y3R5 2298 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 FAM172BPA6NC97 362 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 H0YL77 283 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 CCSO14618 274 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 LRP3O75074 770 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 KNG1P01042 644 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 IGHMP01871 453 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 PRB3Q04118 309 aaPredicted RBP9.13□□□□□ -0.95
VPS11-208ENST00000621676 TRAM1Q15629 374 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 LINC00303Q3SY05 128 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 FBXW9Q5XUX1 488 aa9.13□□□□□ -0.95
VPS11-208ENST00000621676 GDPD1Q8N9F7 314 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms