RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 NKX3-1Q99801 234 aaPredicted RBP11.56□□□□□ -0.56
NEK3-210ENST00000620675 PPIL3Q9H2H8 161 aaKnown RBP11.56□□□□□ -0.56
NEK3-210ENST00000620675 ZNF275Q9NSD4 429 aaPredicted RBP11.56□□□□□ -0.56
NEK3-210ENST00000620675 SF3B6Q9Y3B4 125 aaKnown RBP11.56□□□□□ -0.56
NEK3-210ENST00000620675 ARHGAP32A7KAX9 2087 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 ANKRD30BLA7E2S9 258 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 MTRF1O75570 445 aaKnown RBP11.55□□□□□ -0.56
NEK3-210ENST00000620675 CST4P01036 141 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 CPEP16870 476 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 COL8A2P25067 703 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 ATP5J2P56134 94 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 TAS2R43P59537 309 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 TNFAIP6P98066 277 aaPredicted RBP11.55□□□□□ -0.56
NEK3-210ENST00000620675 TPBGQ13641 420 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 OR8G1Q15617 311 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 MPPED2Q15777 294 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 TMEM42Q69YG0 159 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 HAVCR2Q8TDQ0 301 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 TSEN15Q8WW01 171 aaKnown RBP11.55□□□□□ -0.56
NEK3-210ENST00000620675 YIPF5Q969M3 257 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 HIVEP1P15822 2718 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 CR1P17927 2039 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 IGKV1-9A0A0C4DH69 117 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 TRBV5-5A0A0J9YX44 114 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 TRIM64CA6NLI5 447 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 PIN1P1O15428 100 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 SSX4O60224 188 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 ADH4P08319 380 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 MOGQ16653 247 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 MOB3CQ70IA8 216 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 KRTAP1-3Q8IUG1 177 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 ZNF525Q8N782 197 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 ZNF420Q8TAQ5 688 aaPredicted RBP11.55□□□□□ -0.56
NEK3-210ENST00000620675 UFD1Q92890 307 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 TRMT61AQ96FX7 289 aaKnown RBP11.55□□□□□ -0.56
NEK3-210ENST00000620675 MEGF10Q96KG7 1140 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 PLEKHA1Q9HB21 404 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 CYSLTR2Q9NS75 346 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 ENPP5Q9UJA9 477 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 ZDHHC8Q9ULC8 765 aa11.55□□□□□ -0.56
NEK3-210ENST00000620675 CSPG4Q6UVK1 2322 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 WNK2Q9Y3S1 2297 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 A0A087WXM4 84 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 MAGEA13PA6NCF6 341 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 TPD52L2O43399 206 aaKnown RBP11.54□□□□□ -0.56
NEK3-210ENST00000620675 NRASP01111 189 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 OCM2P0CE71 109 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 BMP4P12644 408 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 PMELP40967 661 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 TMEM91Q6ZNR0 172 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 ZNF826PQ6ZT77 177 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 KRT74Q7RTS7 529 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 OR51A2Q8NGJ7 313 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 TRMT10AQ8TBZ6 339 aaKnown RBP11.54□□□□□ -0.56
NEK3-210ENST00000620675 GPR148Q8TDV2 347 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 OR5P3Q8WZ94 311 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 MUL1Q969V5 352 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 TMEM106AQ96A25 262 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 SPACA5Q96QH8 159 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 GSX2Q9BZM3 304 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 RAB1BQ9H0U4 201 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 SAP30LQ9HAJ7 183 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 ISYNA1Q9NPH2 558 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 UFSP2Q9NUQ7 469 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 CGGBP1Q9UFW8 167 aaPredicted RBP11.54□□□□□ -0.56
NEK3-210ENST00000620675 DHDHQ9UQ10 334 aa11.54□□□□□ -0.56
NEK3-210ENST00000620675 IGKV1-27A0A075B6S5 117 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 F12P00748 615 aaPredicted RBP11.53□□□□□ -0.56
NEK3-210ENST00000620675 CD55P08174 381 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 GNALP38405 381 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 GPM6AP51674 278 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 EFNA4P52798 201 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 CLVS2Q5SYC1 327 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 PLCXD3Q63HM9 321 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 ZDHHC23Q8IYP9 409 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 OR13C9Q8NGT0 318 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 MBD6Q96DN6 1003 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 CHST5Q9GZS9 411 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 TAS2R4Q9NYW5 299 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 TRAV8-7A0A075B6U6 113 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 DHRS7CA6NNS2 312 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 GRPP07492 148 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 DAOP14920 347 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 PAX1P15863 534 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 FABP5Q01469 135 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 YIF1BQ5BJH7 314 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 FAM209AQ5JX71 171 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 SYT6Q5T7P8 510 aaPredicted RBP11.53□□□□□ -0.56
NEK3-210ENST00000620675 CRIP3Q6Q6R5 217 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 MOGAT3Q86VF5 341 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 C11orf53Q8IXP5 236 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 OR8S1Q8NH09 359 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 TMIGD2Q96BF3 282 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 GCM1Q9NP62 436 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 DECR2Q9NUI1 292 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 BEX4Q9NWD9 120 aaPredicted RBP11.53□□□□□ -0.56
NEK3-210ENST00000620675 NKIRAS2Q9NYR9 191 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 ITGB1BP2Q9UKP3 347 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 MPC1Q9Y5U8 109 aa11.53□□□□□ -0.56
NEK3-210ENST00000620675 SC5DO75845 299 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms