RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ITLN1Q8WWA0 313 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 NEU4Q8WWR8 484 aaPredicted RBP13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 OR5P3Q8WZ94 311 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 NINJ1Q92982 152 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 TMEM106AQ96A25 262 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 MICU1Q9BPX6 476 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 CXXC4Q9H2H0 198 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 BEX4Q9NWD9 120 aaPredicted RBP13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 SF3B6Q9Y3B4 125 aaKnown RBP13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 ZNF879B4DU55 563 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 CCRL2O00421 344 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 NCR1O76036 304 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 LY6HO94772 140 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 CD2P06729 351 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 CD55P08174 381 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 JUNBP17275 347 aaPredicted RBP13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 PTH2RP49190 550 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 EFNA4P52798 201 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 MAB21L1Q13394 359 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 INSL4Q14641 139 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 UBE2V2Q15819 145 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 ACSM3Q53FZ2 586 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 PLCXD3Q63HM9 321 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 SERPINA12Q8IW75 414 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 PARP16Q8N5Y8 322 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 ORAI1Q96D31 301 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 MBD6Q96DN6 1003 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 ITPKCQ96DU7 683 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 PERPQ96FX8 193 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 RNF170Q96K19 258 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 MEGF10Q96KG7 1140 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 OR2V2Q96R30 315 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 OR14A2Q96R54 314 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 MRPS26Q9BYN8 205 aaKnown RBP13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 CHST5Q9GZS9 411 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 EGLN1Q9GZT9 426 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 FGF23Q9GZV9 251 aaPredicted RBP13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 ABCB9Q9NP78 766 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 IL19Q9UHD0 177 aa13.25□□□□□ -0.29
PCDHGC3-204ENST00000617222 NBPF19A0A087WUL8 3843 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 POLQO75417 2590 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 F12P00748 615 aaPredicted RBP13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 IGHV4-39P01824 125 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 PAX1P15863 534 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 GABRA5P31644 462 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 CD200P41217 278 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 SRP9P49458 86 aaKnown RBP13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 MZT1Q08AG7 82 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 TRAM1Q15629 374 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 CEACAM21Q3KPI0 293 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 UNQ9370/PRO34162Q6UXP9 181 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 UTS2BQ765I0 119 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 CEACAM19Q7Z692 300 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 OR5A2Q8NGI9 324 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 OR5D14Q8NGL3 314 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 HPSE2Q8WWQ2 592 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 PP6455Q8WZ26 134 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 RTL8AQ9BWD3 113 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 GSX2Q9BZM3 304 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 ZCCHC4Q9H5U6 513 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 SAP30LQ9HAJ7 183 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 C14orf119Q9NWQ9 140 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 NDUFB11Q9NX14 153 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 SLC7A11Q9UPY5 501 aa13.24□□□□□ -0.29
PCDHGC3-204ENST00000617222 TRBV5-7A0A0A0MS05 114 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 LOC100289279A0A1B0GTE1 492 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 ZNF732B4DXR9 585 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 PIN1P1O15428 100 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 CDC14BO60729 498 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 GATBO75879 557 aaKnown RBP13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 GRPP07492 148 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 ATF1P18846 271 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 COL8A2P25067 703 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 PSMA1P25786 263 aaKnown RBP13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 THBS2P35442 1172 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 GPM6AP51674 278 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 TESK1Q15569 626 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 PRAMEF6Q5VXH4 476 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 TMEM91Q6ZNR0 172 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 OR13C9Q8NGT0 318 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 TRMT10AQ8TBZ6 339 aaKnown RBP13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 NPRL2Q8WTW4 380 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 DERL3Q96Q80 235 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 NOX4Q9NPH5 578 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 TAS2R4Q9NYW5 299 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 TREM2Q9NZC2 230 aa13.23□□□□□ -0.29
PCDHGC3-204ENST00000617222 IGKV1-9A0A0C4DH69 117 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 FAM230AA0A1W2PPH8 454 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 LYNX1G3V0Z9 82 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 SSX4O60224 188 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 RGS9O75916 674 aaPredicted RBP13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 LYNX1P0DP58 116 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 DAOP14920 347 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 TNFRSF1AP19438 455 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 MAPK3P27361 379 aaPredicted RBP13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 TGFBR2P37173 567 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 GNG3P63215 75 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 FABP5Q01469 135 aa13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 CNN3Q15417 329 aaKnown RBP13.22□□□□□ -0.29
PCDHGC3-204ENST00000617222 FAM27D1Q5T7N8 215 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms