RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 MAPK3P27361 379 aaPredicted RBP6.86□□□□□ -1.31
PCDH9-205ENST00000614931 GLRXP35754 106 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 GNALP38405 381 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 RAD52P43351 418 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 MAP2K3P46734 347 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 FABP6P51161 128 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 RIPPLY3P57055 190 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 RIPPLY1Q0D2K3 151 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 UBE2V2Q15819 145 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 DEFB113Q30KQ7 82 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 MBNL2Q5VZF2 373 aaKnown RBP6.86□□□□□ -1.31
PCDH9-205ENST00000614931 RGS7BPQ6MZT1 257 aaPredicted RBP6.86□□□□□ -1.31
PCDH9-205ENST00000614931 SLC22A25Q6T423 547 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 Q6ZR03 302 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 USP43Q70EL4 1123 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 KRT74Q7RTS7 529 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 LYPD6Q86Y78 171 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 BHLHE23Q8NDY6 225 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 CCDC54Q8NEL0 328 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 NUP37Q8NFH4 326 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 SEMA6DQ8NFY4 1073 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 OR1M1Q8NGA1 313 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 OR5L1Q8NGL2 311 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 NPRL2Q8WTW4 380 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 HPSE2Q8WWQ2 592 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 HAVCR1Q96D42 359 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 SPACA5Q96QH8 159 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 SYT3Q9BQG1 590 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 DCUN1D5Q9BTE7 237 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 MRPL37Q9BZE1 423 aaKnown RBP6.86□□□□□ -1.31
PCDH9-205ENST00000614931 BCL2L14Q9BZR8 327 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 CHST5Q9GZS9 411 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 ZCCHC4Q9H5U6 513 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 OPA3Q9H6K4 179 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 PLEKHA1Q9HB21 404 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 NGBQ9NPG2 151 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 SNTG1Q9NSN8 517 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 FOXJ3Q9UPW0 622 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 GSTK1Q9Y2Q3 226 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 AK6Q9Y3D8 172 aaKnown RBP6.86□□□□□ -1.31
PCDH9-205ENST00000614931 ATP23Q9Y6H3 246 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 PMF1-BGLAPU3KQ54 211 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 DSCAMO60469 2012 aa6.86□□□□□ -1.31
PCDH9-205ENST00000614931 MED13LQ71F56 2210 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 CCDC168Q8NDH2 2452 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 F8P00451 2351 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 IGLV3-9A0A075B6K5 115 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 IGKV1-27A0A075B6S5 117 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 A0A0B4J203 849 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF816-ZNF321PA0A0X1KG74 233 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF850A8MQ14 1090 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 H0YL77 283 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 MLNRO43193 412 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 GMDSO60547 372 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 MTRF1O75570 445 aaKnown RBP6.85□□□□□ -1.31
PCDH9-205ENST00000614931 ARL6IP5O75915 188 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 CST4P01036 141 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 IL1AP01583 271 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 CD3EP07766 207 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 SLC2A2P11168 524 aaPredicted RBP6.85□□□□□ -1.31
PCDH9-205ENST00000614931 ATF1P18846 271 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 SRMP19623 302 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 CFL1P23528 166 aaKnown RBP6.85□□□□□ -1.31
PCDH9-205ENST00000614931 MYL9P24844 172 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 HNRNPA0Q13151 305 aaKnown RBP6.85□□□□□ -1.31
PCDH9-205ENST00000614931 PRDX4Q13162 271 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 ADIPOQQ15848 244 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF718Q3SXZ3 478 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 ZBTB37Q5TC79 503 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 MOB3CQ70IA8 216 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 UTS2BQ765I0 119 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 OR52N4Q8NGI2 321 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 SYNPRQ8TBG9 265 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 TRMT10AQ8TBZ6 339 aaKnown RBP6.85□□□□□ -1.31
PCDH9-205ENST00000614931 PIGCQ92535 297 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 PIGTQ969N2 578 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 MRPL24Q96A35 216 aaKnown RBP6.85□□□□□ -1.31
PCDH9-205ENST00000614931 TPK1Q9H3S4 243 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 ESRP2Q9H6T0 727 aaKnown RBP6.85□□□□□ -1.31
PCDH9-205ENST00000614931 CA10Q9NS85 328 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 BEX4Q9NWD9 120 aaPredicted RBP6.85□□□□□ -1.31
PCDH9-205ENST00000614931 CGGBP1Q9UFW8 167 aaPredicted RBP6.85□□□□□ -1.31
PCDH9-205ENST00000614931 RNF115Q9Y4L5 304 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 PRRC2AP48634 2157 aaKnown RBP6.85□□□□□ -1.31
PCDH9-205ENST00000614931 SPG11Q96JI7 2443 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 DYSFO75923 2080 aa6.85□□□□□ -1.31
PCDH9-205ENST00000614931 A0A1B0GWJ7 208 aa6.84□□□□□ -1.31
PCDH9-205ENST00000614931 ZSCAN5BA6NJL1 495 aa6.84□□□□□ -1.31
PCDH9-205ENST00000614931 SULT1B1O43704 296 aa6.84□□□□□ -1.31
PCDH9-205ENST00000614931 TIMM8AO60220 97 aaPredicted RBP6.84□□□□□ -1.31
PCDH9-205ENST00000614931 NRASP01111 189 aa6.84□□□□□ -1.31
PCDH9-205ENST00000614931 IGHV3-13P01766 116 aa6.84□□□□□ -1.31
PCDH9-205ENST00000614931 CD37P11049 281 aa6.84□□□□□ -1.31
PCDH9-205ENST00000614931 ZNF12P17014 697 aa6.84□□□□□ -1.31
PCDH9-205ENST00000614931 RAB3BP20337 219 aa6.84□□□□□ -1.31
PCDH9-205ENST00000614931 TUBG1P23258 451 aa6.84□□□□□ -1.31
PCDH9-205ENST00000614931 CA6P23280 308 aa6.84□□□□□ -1.31
PCDH9-205ENST00000614931 AZGP1P25311 298 aaKnown RBP6.84□□□□□ -1.31
PCDH9-205ENST00000614931 THBS2P35442 1172 aa6.84□□□□□ -1.31
PCDH9-205ENST00000614931 RBMXP38159 391 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms