RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 NUFIP1Q9UHK0 495 aaKnown RBP9.83□□□□□ -0.84
LINC00539-204ENST00000608957 DUSP13Q9UII6 198 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 FBXO9Q9UK97 447 aaPredicted RBP9.83□□□□□ -0.84
LINC00539-204ENST00000608957 SLC22A13Q9Y226 551 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 TRBV5-5A0A0J9YX44 114 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 ZNF879B4DU55 563 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 M0R135 149 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 GATBO75879 557 aaKnown RBP9.82□□□□□ -0.84
LINC00539-204ENST00000608957 IL1AP01583 271 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 APOC1P02654 83 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 ISG15P05161 165 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 UBCP0CG48 685 aaKnown RBP9.82□□□□□ -0.84
LINC00539-204ENST00000608957 ACHEP22303 614 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 CCNOP22674 350 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 MYL9P24844 172 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 OTX1P32242 354 aaPredicted RBP9.82□□□□□ -0.84
LINC00539-204ENST00000608957 MAGEB1P43366 347 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 HTR5AP47898 357 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 PLP2Q04941 152 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 DGUOKQ16854 277 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 KRTAP27-1Q3LI81 207 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 Q499Y3 187 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 ZMAT1Q5H9K5 638 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 CYB5R2Q6BCY4 276 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 RFPL4BQ6ZWI9 263 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 ELMOD2Q8IZ81 293 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 OR1J2Q8NGS2 313 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 SYNPRQ8TBG9 265 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 GPR148Q8TDV2 347 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 PHYHIPQ92561 330 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 THRSPQ92748 146 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 ZNF799Q96GE5 643 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 OR14A2Q96R54 314 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 MDFIQ99750 246 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 PBOV1Q9GZY1 135 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 POFUT1Q9H488 388 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 BRD7Q9NPI1 651 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 ATPIF1Q9UII2 106 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 SVEP1Q4LDE5 3571 aa9.82□□□□□ -0.84
LINC00539-204ENST00000608957 C5orf49A4QMS7 147 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 ACOD1A6NK06 481 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 F5H5K5 113 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 WNT9BO14905 357 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 RP2O75695 350 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 ARL6IP5O75915 188 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 CDRT1O95170 752 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 NGFP01138 241 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 ANXA2P07355 339 aaKnown RBP9.81□□□□□ -0.84
LINC00539-204ENST00000608957 DBHP09172 617 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 UCHL1P09936 223 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 OCM2P0CE71 109 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 MAPK3P27361 379 aaPredicted RBP9.81□□□□□ -0.84
LINC00539-204ENST00000608957 CALRP27797 417 aaKnown RBP9.81□□□□□ -0.84
LINC00539-204ENST00000608957 SDC2P34741 201 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 MTNR1BP49286 362 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 TPTEP56180 551 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 KLF3P57682 345 aaPredicted RBP9.81□□□□□ -0.84
LINC00539-204ENST00000608957 ODF4Q2M2E3 257 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 SPATA46Q5T0L3 261 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 FAM27D1Q5T7N8 215 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 TMEM244Q5VVB8 128 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 DRAM2Q6UX65 266 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 UNQ9370/PRO34162Q6UXP9 181 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 OR8B12Q8NGG6 310 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 OR1J1Q8NGS3 322 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 OR10AC1Q8NH08 325 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 SLC25A40Q8TBP6 338 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 TSEN15Q8WW01 171 aaKnown RBP9.81□□□□□ -0.84
LINC00539-204ENST00000608957 SLC7A6Q92536 515 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 PPP1R14AQ96A00 147 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 MARS2Q96GW9 593 aaKnown RBP9.81□□□□□ -0.84
LINC00539-204ENST00000608957 DERL3Q96Q80 235 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 TSC22D3Q99576 134 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 BCL2L14Q9BZR8 327 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 MS4A5Q9H3V2 200 aa9.81□□□□□ -0.84
LINC00539-204ENST00000608957 LOC107986453A0A1B0GWG9 222 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 C17orf100A8MU93 164 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 P2RY10O00398 339 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 IGHV3-13P01766 116 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 TTRP02766 147 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 ERCC1P07992 297 aaPredicted RBP9.8□□□□□ -0.84
LINC00539-204ENST00000608957 ACSM4P0C7M7 580 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 COX5BP10606 129 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 SLC2A1P11166 492 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 SOX6P35712 828 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 RAD52P43351 418 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 SLC6A9P48067 706 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 SOX2P48431 317 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 GZMKP49863 264 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 HNRNPA0Q13151 305 aaKnown RBP9.8□□□□□ -0.84
LINC00539-204ENST00000608957 HSD17B12Q53GQ0 312 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 SPRNQ5BIV9 151 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 IL17RELQ6ZVW7 336 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 FAM57BQ71RH2 274 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 PRSS45Q7RTY3 260 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 RDH10Q8IZV5 341 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 OR51A4Q8NGJ6 313 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 PGAM5Q96HS1 289 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 OR2J1Q9GZK6 312 aa9.8□□□□□ -0.84
LINC00539-204ENST00000608957 SLIRPQ9GZT3 109 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms