RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ACSM3Q53FZ2 586 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 SPRNQ5BIV9 151 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 ZMAT1Q5H9K5 638 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 CLVS2Q5SYC1 327 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 ZBTB37Q5TC79 503 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 PLCXD3Q63HM9 321 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 TMEM42Q69YG0 159 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 CD200R1LQ6Q8B3 271 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 MOB3CQ70IA8 216 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 CEACAM19Q7Z692 300 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 ZDHHC23Q8IYP9 409 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 FTMTQ8N4E7 242 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 MS4A15Q8N5U1 240 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 CCDC54Q8NEL0 328 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 OR13F1Q8NGS4 319 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 OR13G1Q8NGZ3 307 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 HPSE2Q8WWQ2 592 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 PP6455Q8WZ26 134 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 PIGCQ92535 297 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 ITPKCQ96DU7 683 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 YIPF6Q96EC8 236 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 SORCS2Q96PQ0 1159 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 DERL3Q96Q80 235 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 CHST5Q9GZS9 411 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 FGF23Q9GZV9 251 aaPredicted RBP6.53□□□□□ -1.36
MSH6-211ENST00000606499 OR51E2Q9H255 320 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 PPIL3Q9H2H8 161 aaKnown RBP6.53□□□□□ -1.36
MSH6-211ENST00000606499 NOX4Q9NPH5 578 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 CYSLTR2Q9NS75 346 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 TAS2R4Q9NYW5 299 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 SCOCQ9UIL1 159 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 PLEKHA6Q9Y2H5 1048 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 PMF1-BGLAPU3KQ54 211 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 DSCAMO60469 2012 aa6.53□□□□□ -1.36
MSH6-211ENST00000606499 ARFGEF3Q5TH69 2177 aa6.52□□□□□ -1.36
MSH6-211ENST00000606499 IGKV1-9A0A0C4DH69 117 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 LOC100289279A0A1B0GTE1 492 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 OVOL3O00110 214 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 TPD52L2O43399 206 aaKnown RBP6.52□□□□□ -1.37
MSH6-211ENST00000606499 SERPINA3P01011 423 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 NRASP01111 189 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 RAF1P04049 648 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 ADH4P08319 380 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 PSMA1P25786 263 aaKnown RBP6.52□□□□□ -1.37
MSH6-211ENST00000606499 MAPK3P27361 379 aaPredicted RBP6.52□□□□□ -1.37
MSH6-211ENST00000606499 CRYBB2P43320 205 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 GPM6AP51674 278 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 TNFAIP6P98066 277 aaPredicted RBP6.52□□□□□ -1.37
MSH6-211ENST00000606499 TRAM1Q15629 374 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 PRAMEF6Q5VXH4 476 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 C22orf42Q6IC83 251 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 UNQ9370/PRO34162Q6UXP9 181 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 KRT74Q7RTS7 529 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 RNF144BQ7Z419 303 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 WDR86Q86TI4 376 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 SERPINA12Q8IW75 414 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 PARP16Q8N5Y8 322 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 OR51A2Q8NGJ7 313 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 OR8S1Q8NH09 359 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 TRMT10AQ8TBZ6 339 aaKnown RBP6.52□□□□□ -1.37
MSH6-211ENST00000606499 ITLN1Q8WWA0 313 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 OR5P3Q8WZ94 311 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 RPL3LQ92901 407 aaKnown RBP6.52□□□□□ -1.37
MSH6-211ENST00000606499 PIGTQ969N2 578 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 C10orf35Q96D05 121 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 MEGF10Q96KG7 1140 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 LURAP1Q96LR2 239 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 SPACA5Q96QH8 159 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 OR2V2Q96R30 315 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 NKX3-1Q99801 234 aaPredicted RBP6.52□□□□□ -1.37
MSH6-211ENST00000606499 CHCHD6Q9BRQ6 235 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 FUNDC2Q9BWH2 189 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 MS4A5Q9H3V2 200 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 EXOSC4Q9NPD3 245 aaKnown RBP6.52□□□□□ -1.37
MSH6-211ENST00000606499 ZDHHC8Q9ULC8 765 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 STUB1Q9UNE7 303 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 MPC1Q9Y5U8 109 aa6.52□□□□□ -1.37
MSH6-211ENST00000606499 CHD3Q12873 2000 aaKnown RBP6.52□□□□□ -1.37
MSH6-211ENST00000606499 IGKV1-27A0A075B6S5 117 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.51□□□□□ -1.37
MSH6-211ENST00000606499 LOC100506127A0A0U1RQW1 187 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 FAM230AA0A1W2PPH8 454 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 ANXA2P2A6NMY6 339 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 ZNF732B4DXR9 585 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 LYNX1G3V0Z9 82 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 SULT1B1O43704 296 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 GPX5O75715 221 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 GATBO75879 557 aaKnown RBP6.51□□□□□ -1.37
MSH6-211ENST00000606499 IGHV4-39P01824 125 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 HPXP02790 462 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 GRPP07492 148 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 CD55P08174 381 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 UCHL1P09936 223 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 LYNX1P0DP58 116 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 BMP4P12644 408 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 IGFBP3P17936 291 aaPredicted RBP6.51□□□□□ -1.37
MSH6-211ENST00000606499 FSTP19883 344 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 TNFSF4P23510 183 aa6.51□□□□□ -1.37
MSH6-211ENST00000606499 AZGP1P25311 298 aaKnown RBP6.51□□□□□ -1.37
MSH6-211ENST00000606499 CALRP27797 417 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms