RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 TRAF4Q9BUZ4 470 aaPredicted RBP17.43■□□□□ 0.38
PNKP-215ENST00000600910 NAA50Q9GZZ1 169 aaKnown RBP17.43■□□□□ 0.38
PNKP-215ENST00000600910 SLC22A4Q9H015 551 aa17.43■□□□□ 0.38
PNKP-215ENST00000600910 ZCCHC4Q9H5U6 513 aa17.43■□□□□ 0.38
PNKP-215ENST00000600910 DYNLRB1Q9NP97 96 aa17.43■□□□□ 0.38
PNKP-215ENST00000600910 TRAV8-7A0A075B6U6 113 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 A0A1B0GWJ7 208 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 SPRY3O43610 288 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 ARL6IP5O75915 188 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 CALRP27797 417 aaKnown RBP17.42■□□□□ 0.38
PNKP-215ENST00000600910 OR8G1Q15617 311 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 C20orf204Q6ZNR8 217 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 MOB3CQ70IA8 216 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 ANKRD13BQ86YJ7 626 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 CLVS1Q8IUQ0 354 aaPredicted RBP17.42■□□□□ 0.38
PNKP-215ENST00000600910 OR2Z1Q8NG97 314 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 PHYHIPQ92561 330 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 CENPOQ9BU64 300 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 CKLFQ9UBR5 152 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 FBN2P35556 2912 aa17.42■□□□□ 0.38
PNKP-215ENST00000600910 IGFBP3P17936 291 aaPredicted RBP17.41■□□□□ 0.38
PNKP-215ENST00000600910 FSTP19883 344 aa17.41■□□□□ 0.38
PNKP-215ENST00000600910 LSM3P62310 102 aaKnown RBP17.41■□□□□ 0.38
PNKP-215ENST00000600910 SLC16A12Q6ZSM3 486 aa17.41■□□□□ 0.38
PNKP-215ENST00000600910 ZCCHC24Q8N2G6 241 aaKnown RBP17.41■□□□□ 0.38
PNKP-215ENST00000600910 HPSE2Q8WWQ2 592 aa17.41■□□□□ 0.38
PNKP-215ENST00000600910 ITPKCQ96DU7 683 aa17.41■□□□□ 0.38
PNKP-215ENST00000600910 RNF167Q9H6Y7 350 aa17.41■□□□□ 0.38
PNKP-215ENST00000600910 GSTK1Q9Y2Q3 226 aa17.41■□□□□ 0.38
PNKP-215ENST00000600910 NBPF19A0A087WUL8 3843 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 IGKV1-9A0A0C4DH69 117 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 ANXA2P2A6NMY6 339 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 C17orf100A8MU93 164 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 SULT1B1O43704 296 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 SRMP19623 302 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 RAB3AP20336 220 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 PPP3R1P63098 170 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 CEACAM21Q3KPI0 293 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 ZNF529Q6P280 563 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 GDPGP1Q6ZNW5 385 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 OR1M1Q8NGA1 313 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 OR51A2Q8NGJ7 313 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 OR8S1Q8NH09 359 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 NPRL2Q8WTW4 380 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 OR5P3Q8WZ94 311 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 MS4A5Q9H3V2 200 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 TCF7L1Q9HCS4 588 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 ZDHHC8Q9ULC8 765 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 FOXJ3Q9UPW0 622 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 NOP16Q9Y3C1 178 aaKnown RBP17.4■□□□□ 0.38
PNKP-215ENST00000600910 CENPEQ02224 2701 aa17.4■□□□□ 0.38
PNKP-215ENST00000600910 GABARAPO95166 117 aa17.39■□□□□ 0.38
PNKP-215ENST00000600910 IGHV1-46P01743 117 aa17.39■□□□□ 0.38
PNKP-215ENST00000600910 OCMP0CE72 109 aaPredicted RBP17.39■□□□□ 0.38
PNKP-215ENST00000600910 PRF1P14222 555 aa17.39■□□□□ 0.38
PNKP-215ENST00000600910 ATF1P18846 271 aa17.39■□□□□ 0.38
PNKP-215ENST00000600910 CNN3Q15417 329 aaKnown RBP17.39■□□□□ 0.38
PNKP-215ENST00000600910 ELMOD3Q96FG2 381 aa17.39■□□□□ 0.38
PNKP-215ENST00000600910 TECTBQ96PL2 329 aa17.39■□□□□ 0.38
PNKP-215ENST00000600910 HIST1H2AAQ96QV6 131 aa17.39■□□□□ 0.38
PNKP-215ENST00000600910 FGF23Q9GZV9 251 aaPredicted RBP17.39■□□□□ 0.38
PNKP-215ENST00000600910 TPK1Q9H3S4 243 aa17.39■□□□□ 0.38
PNKP-215ENST00000600910 ABCB9Q9NP78 766 aa17.39■□□□□ 0.38
PNKP-215ENST00000600910 ARFGEF3Q5TH69 2177 aa17.39■□□□□ 0.37
PNKP-215ENST00000600910 F5H5P2 479 aa17.39■□□□□ 0.37
PNKP-215ENST00000600910 BMP4P12644 408 aa17.39■□□□□ 0.37
PNKP-215ENST00000600910 TGFBR1P36897 503 aa17.39■□□□□ 0.37
PNKP-215ENST00000600910 PPOXP50336 477 aa17.39■□□□□ 0.37
PNKP-215ENST00000600910 TRMT10AQ8TBZ6 339 aaKnown RBP17.39■□□□□ 0.37
PNKP-215ENST00000600910 KCTD7Q96MP8 289 aa17.39■□□□□ 0.37
PNKP-215ENST00000600910 CACNG6Q9BXT2 260 aa17.39■□□□□ 0.37
PNKP-215ENST00000600910 LIME1Q9H400 295 aa17.39■□□□□ 0.37
PNKP-215ENST00000600910 FBXO9Q9UK97 447 aaPredicted RBP17.39■□□□□ 0.37
PNKP-215ENST00000600910 SLC7A11Q9UPY5 501 aa17.39■□□□□ 0.37
PNKP-215ENST00000600910 PMF1-BGLAPU3KQ54 211 aa17.39■□□□□ 0.37
PNKP-215ENST00000600910 TACC2O95359 2948 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.38■□□□□ 0.37
PNKP-215ENST00000600910 SHISA3A0PJX4 238 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 ALX3O95076 343 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 MAS1P04201 325 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 AZGP1P25311 298 aaKnown RBP17.38■□□□□ 0.37
PNKP-215ENST00000600910 THBS2P35442 1172 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 KRTAP10-9P60411 292 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 CTF1Q16619 201 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 NRGNQ92686 78 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 RNF170Q96K19 258 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 DIRC2Q96SL1 478 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 VRK1Q99986 396 aaPredicted RBP17.38■□□□□ 0.37
PNKP-215ENST00000600910 MICU1Q9BPX6 476 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 RTL8AQ9BWD3 113 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 SLITRK2Q9H156 845 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 CEPT1Q9Y6K0 416 aa17.38■□□□□ 0.37
PNKP-215ENST00000600910 DSCAMO60469 2012 aa17.37■□□□□ 0.37
PNKP-215ENST00000600910 FAM230AA0A1W2PPH8 454 aa17.37■□□□□ 0.37
PNKP-215ENST00000600910 ADH4P08319 380 aa17.37■□□□□ 0.37
PNKP-215ENST00000600910 MYL9P24844 172 aa17.37■□□□□ 0.37
PNKP-215ENST00000600910 GPM6AP51674 278 aa17.37■□□□□ 0.37
PNKP-215ENST00000600910 VBP1P61758 197 aa17.37■□□□□ 0.37
PNKP-215ENST00000600910 NCS1P62166 190 aa17.37■□□□□ 0.37
PNKP-215ENST00000600910 MAB21L1Q13394 359 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms