RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 OR5D14Q8NGL3 314 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 DVL3Q92997 716 aaPredicted RBP11.58□□□□□ -0.56
VMP1-210ENST00000589823 TMEM203Q969S6 136 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 TMEM106AQ96A25 262 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 ADAT3Q96EY9 351 aaPredicted RBP11.58□□□□□ -0.56
VMP1-210ENST00000589823 TECTBQ96PL2 329 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 RTL8AQ9BWD3 113 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 CHST5Q9GZS9 411 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 CXXC4Q9H2H0 198 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 SAP30LQ9HAJ7 183 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 NEK6Q9HC98 313 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 GPR173Q9NS66 373 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 ZNF701Q9NV72 531 aaPredicted RBP11.58□□□□□ -0.56
VMP1-210ENST00000589823 IL19Q9UHD0 177 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 SLC7A11Q9UPY5 501 aa11.58□□□□□ -0.56
VMP1-210ENST00000589823 LRBAP50851 2863 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 ZNF879B4DU55 563 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 JUNBP17275 347 aaPredicted RBP11.57□□□□□ -0.56
VMP1-210ENST00000589823 TNFRSF1AP19438 455 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 CD200P41217 278 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 PTH2RP49190 550 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 EFNA4P52798 201 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 RPS11P62280 158 aaKnown RBP eCLIP11.57□□□□□ -0.56
VMP1-210ENST00000589823 CNN3Q15417 329 aaKnown RBP11.57□□□□□ -0.56
VMP1-210ENST00000589823 TESK1Q15569 626 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 SSX1Q16384 188 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 DEFB113Q30KQ7 82 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 CEACAM21Q3KPI0 293 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 ACSM3Q53FZ2 586 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 CEP78Q5JTW2 689 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 UTS2BQ765I0 119 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 PARP16Q8N5Y8 322 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 CELF2-AS1Q8N7Q2 184 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 OR5A2Q8NGI9 324 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 UBASH3BQ8TF42 649 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 OR5P3Q8WZ94 311 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 MBD6Q96DN6 1003 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 ITPKCQ96DU7 683 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 PERPQ96FX8 193 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 RNF170Q96K19 258 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 MEGF10Q96KG7 1140 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 OR2V2Q96R30 315 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 OR14A2Q96R54 314 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 GSX2Q9BZM3 304 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 ZCCHC4Q9H5U6 513 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 PPP1R3EQ9H7J1 279 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 BARX1Q9HBU1 254 aaPredicted RBP11.57□□□□□ -0.56
VMP1-210ENST00000589823 NDUFB11Q9NX14 153 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 CKLFQ9UBR5 152 aa11.57□□□□□ -0.56
VMP1-210ENST00000589823 RGS9O75916 674 aaPredicted RBP11.56□□□□□ -0.56
VMP1-210ENST00000589823 F12P00748 615 aaPredicted RBP11.56□□□□□ -0.56
VMP1-210ENST00000589823 PAX1P15863 534 aa11.56□□□□□ -0.56
VMP1-210ENST00000589823 ATF1P18846 271 aa11.56□□□□□ -0.56
VMP1-210ENST00000589823 ATP5J2P56134 94 aa11.56□□□□□ -0.56
VMP1-210ENST00000589823 UBE2V2Q15819 145 aa11.56□□□□□ -0.56
VMP1-210ENST00000589823 CEACAM19Q7Z692 300 aa11.56□□□□□ -0.56
VMP1-210ENST00000589823 OR13C9Q8NGT0 318 aa11.56□□□□□ -0.56
VMP1-210ENST00000589823 ITLN1Q8WWA0 313 aa11.56□□□□□ -0.56
VMP1-210ENST00000589823 DERL3Q96Q80 235 aa11.56□□□□□ -0.56
VMP1-210ENST00000589823 SF3B6Q9Y3B4 125 aaKnown RBP11.56□□□□□ -0.56
VMP1-210ENST00000589823 ABCA12Q86UK0 2595 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 TRBV5-7A0A0A0MS05 114 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 OR5B21A6NL26 309 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 TMEM210A6NLX4 147 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 ZNF732B4DXR9 585 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 MAGEB3O15480 346 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 SULT1B1O43704 296 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 NDUFS7O75251 213 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 NCR1O76036 304 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 HPXP02790 462 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 GRPP07492 148 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 RAB3AP20336 220 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 PRKACBP22694 351 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 GPM6AP51674 278 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 FUT6P51993 359 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 PPP3R1P63098 170 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 GNG3P63215 75 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 MAB21L1Q13394 359 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 UNQ9370/PRO34162Q6UXP9 181 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 TRMT10AQ8TBZ6 339 aaKnown RBP11.55□□□□□ -0.56
VMP1-210ENST00000589823 NPRL2Q8WTW4 380 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 HPSE2Q8WWQ2 592 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 PHYHIPQ92561 330 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 RDH5Q92781 318 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 SPSB1Q96BD6 273 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 BORCS8Q96FH0 119 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 NOX4Q9NPH5 578 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 ASH1LQ9NR48 2969 aaKnown RBP11.55□□□□□ -0.56
VMP1-210ENST00000589823 TAS2R4Q9NYW5 299 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 SCOCQ9UIL1 159 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 AKAP6Q13023 2319 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 CACNA1DQ01668 2161 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 ARFGEF3Q5TH69 2177 aa11.55□□□□□ -0.56
VMP1-210ENST00000589823 APCP25054 2843 aa11.54□□□□□ -0.56
VMP1-210ENST00000589823 IGHV1-69-2A0A0G2JMI3 117 aa11.54□□□□□ -0.56
VMP1-210ENST00000589823 IGHV3-64DA0A0J9YX35 117 aa11.54□□□□□ -0.56
VMP1-210ENST00000589823 LOC100289279A0A1B0GTE1 492 aa11.54□□□□□ -0.56
VMP1-210ENST00000589823 FAM230AA0A1W2PPH8 454 aa11.54□□□□□ -0.56
VMP1-210ENST00000589823 A0A1W2PPK0 400 aa11.54□□□□□ -0.56
VMP1-210ENST00000589823 A6NLC8 198 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms