RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ZCCHC4Q9H5U6 513 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 NOX4Q9NPH5 578 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 TAS2R4Q9NYW5 299 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 CKLFQ9UBR5 152 aa12.92□□□□□ -0.34
ATG4D-211ENST00000589753 ADH4P08319 380 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 UCHL1P09936 223 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 TNFSF4P23510 183 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 GADD45AP24522 165 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 CNN3Q15417 329 aaKnown RBP12.91□□□□□ -0.34
ATG4D-211ENST00000589753 UBE2V2Q15819 145 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 PCGF3Q3KNV8 242 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 CEACAM21Q3KPI0 293 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 TIMM50Q3ZCQ8 353 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 SPERTQ8NA61 448 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 OR13C9Q8NGT0 318 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 IGFBPL1Q8WX77 278 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 OR5P3Q8WZ94 311 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 ORAI1Q96D31 301 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 ITPKCQ96DU7 683 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 MICU1Q9BPX6 476 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 OR51E2Q9H255 320 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 CXXC4Q9H2H0 198 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 CXorf56Q9H5V9 222 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 EXOSC4Q9NPD3 245 aaKnown RBP12.91□□□□□ -0.34
ATG4D-211ENST00000589753 NKIRAS2Q9NYR9 191 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 EDARQ9UNE0 448 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 SSR3Q9UNL2 185 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 PLCE1Q9P212 2302 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 ASH1LQ9NR48 2969 aaKnown RBP12.91□□□□□ -0.34
ATG4D-211ENST00000589753 ABCA4P78363 2273 aa12.91□□□□□ -0.34
ATG4D-211ENST00000589753 HRNRQ86YZ3 2850 aaPredicted RBP12.91□□□□□ -0.34
ATG4D-211ENST00000589753 F5H5P2 479 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 H7C417 338 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 OVOL3O00110 214 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 PIN1P1O15428 100 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 SULT1B1O43704 296 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 GPX5O75715 221 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 ARL6IP5O75915 188 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 ERCC1P07992 297 aaPredicted RBP12.9□□□□□ -0.34
ATG4D-211ENST00000589753 OCMP0CE72 109 aaPredicted RBP12.9□□□□□ -0.34
ATG4D-211ENST00000589753 ATF1P18846 271 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 FSTP19883 344 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 RAB3AP20336 220 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 CDKN1AP38936 164 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 PPP3R1P63098 170 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 TNFAIP6P98066 277 aaPredicted RBP12.9□□□□□ -0.34
ATG4D-211ENST00000589753 MZT1Q08AG7 82 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 HSD17B12Q53GQ0 312 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 DMRTC1Q5HYR2 192 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 FAM209AQ5JX71 171 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 FAM27D1Q5T7N8 215 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 ASPHD2Q6ICH7 369 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 OR1M1Q8NGA1 313 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 OR5A2Q8NGI9 324 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 HPSE2Q8WWQ2 592 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 TRMT61AQ96FX7 289 aaKnown RBP12.9□□□□□ -0.34
ATG4D-211ENST00000589753 RNF170Q96K19 258 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 CHCHD6Q9BRQ6 235 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 RTL8AQ9BWD3 113 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 FUNDC2Q9BWH2 189 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 RAB1BQ9H0U4 201 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 C14orf119Q9NWQ9 140 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 IL19Q9UHD0 177 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 FOXJ3Q9UPW0 622 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 SLC7A11Q9UPY5 501 aa12.9□□□□□ -0.34
ATG4D-211ENST00000589753 TRAV8-7A0A075B6U6 113 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 IGKV1-9A0A0C4DH69 117 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 LOC100506127A0A0U1RQW1 187 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 TPD52L2O43399 206 aaKnown RBP12.89□□□□□ -0.35
ATG4D-211ENST00000589753 AIREO43918 545 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 ALX3O95076 343 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 CD55P08174 381 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 IGFBP3P17936 291 aaPredicted RBP12.89□□□□□ -0.35
ATG4D-211ENST00000589753 FGF9P31371 208 aaPredicted RBP12.89□□□□□ -0.35
ATG4D-211ENST00000589753 CD200P41217 278 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 SRP9P49458 86 aaKnown RBP12.89□□□□□ -0.35
ATG4D-211ENST00000589753 CCL8P80075 99 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 C22orf42Q6IC83 251 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 ZNF529Q6P280 563 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 SATL1Q86VE3 508 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 TRMT10AQ8TBZ6 339 aaKnown RBP12.89□□□□□ -0.35
ATG4D-211ENST00000589753 NPRL2Q8WTW4 380 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 SPSB1Q96BD6 273 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 SORCS2Q96PQ0 1159 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 OR2V2Q96R30 315 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 EGLN1Q9GZT9 426 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 PPIL3Q9H2H8 161 aaKnown RBP12.89□□□□□ -0.35
ATG4D-211ENST00000589753 NEK6Q9HC98 313 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 TCF7L1Q9HCS4 588 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 DECR2Q9NUI1 292 aa12.89□□□□□ -0.35
ATG4D-211ENST00000589753 TXNL4BQ9NX01 149 aaKnown RBP12.89□□□□□ -0.35
ATG4D-211ENST00000589753 FLNBO75369 2602 aaKnown RBP12.89□□□□□ -0.35
ATG4D-211ENST00000589753 OR5B21A6NL26 309 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 SRMP19623 302 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 PRKACBP22694 351 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 AZGP1P25311 298 aaKnown RBP12.88□□□□□ -0.35
ATG4D-211ENST00000589753 CALRP27797 417 aaKnown RBP12.88□□□□□ -0.35
ATG4D-211ENST00000589753 THBS2P35442 1172 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 GPM6AP51674 278 aa12.88□□□□□ -0.35
ATG4D-211ENST00000589753 FUT6P51993 359 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms