RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 RTL8AQ9BWD3 113 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 TSSK6Q9BXA6 273 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 MEGF9Q9H1U4 602 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 RANBP3Q9H6Z4 567 aaPredicted RBP11.44□□□□□ -0.58
VMP1-209ENST00000588915 RAB18Q9NP72 206 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 DNAJB11Q9UBS4 358 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 SLC25A10Q9UBX3 287 aaPredicted RBP11.44□□□□□ -0.58
VMP1-209ENST00000588915 RHBDD3Q9Y3P4 386 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 MAB21L2Q9Y586 359 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 LYVE1Q9Y5Y7 322 aa11.44□□□□□ -0.58
VMP1-209ENST00000588915 TET2Q6N021 2002 aaPredicted RBP11.43□□□□□ -0.58
VMP1-209ENST00000588915 NKX6-3A6NJ46 265 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 TNFRSF11BO00300 401 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 SIGLEC5O15389 551 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 CST4P01036 141 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 GASTP01350 101 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 IFNGP01579 166 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 ACAA1P09110 424 aaPredicted RBP11.43□□□□□ -0.58
VMP1-209ENST00000588915 EFNB2P52799 333 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 ZNF121P58317 390 aaPredicted RBP11.43□□□□□ -0.58
VMP1-209ENST00000588915 ELF3P78545 371 aaPredicted RBP11.43□□□□□ -0.58
VMP1-209ENST00000588915 MXRA7P84157 204 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 EIF2B1Q14232 305 aaKnown RBP11.43□□□□□ -0.58
VMP1-209ENST00000588915 LINC01590Q5TEZ4 76 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 SAMD5Q5TGI4 173 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 ZNF770Q6IQ21 691 aaPredicted RBP11.43□□□□□ -0.58
VMP1-209ENST00000588915 FAM57BQ71RH2 274 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 CPLX4Q7Z7G2 160 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 PGAM4Q8N0Y7 254 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 PAPD5Q8NDF8 572 aaKnown RBP11.43□□□□□ -0.58
VMP1-209ENST00000588915 OR2T33Q8NG76 320 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 OR5T2Q8NGG2 359 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 OR8D4Q8NGM9 314 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 ANGPTL6Q8NI99 470 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 CFHR4Q92496 578 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 H1FXQ92522 213 aaKnown RBP11.43□□□□□ -0.58
VMP1-209ENST00000588915 SEH1LQ96EE3 360 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 ABHD6Q9BV23 337 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 PAPOLGQ9BWT3 736 aaKnown RBP11.43□□□□□ -0.58
VMP1-209ENST00000588915 PPA2Q9H2U2 334 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 ZNF391Q9UJN7 358 aa11.43□□□□□ -0.58
VMP1-209ENST00000588915 TRBV23-1A0A0A0MS06 115 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 ARPC2O15144 300 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 GYPBP06028 91 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 ZNF3P17036 446 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 DGUOKQ16854 277 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 LIAT1Q6ZQX7 453 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 KRT74Q7RTS7 529 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 OR9Q2Q8NGE9 314 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 OR6K6Q8NGW6 343 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 OR5P3Q8WZ94 311 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 PPP1R14AQ96A00 147 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 GAFA1Q96PS6 74 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 INTS14Q96SY0 518 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 SSX3Q99909 188 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 WDR13Q9H1Z4 485 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 TBC1D23Q9NUY8 699 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 ZNF319Q9P2F9 582 aa11.42□□□□□ -0.58
VMP1-209ENST00000588915 A0A1W2PQ09 198 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 RIIAD1A6NNX1 92 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 G3V4G9 280 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 CCNB2O95067 398 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 NDUFB7P17568 137 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 POU1F1P28069 291 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 DCTDP32321 178 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 OPRL1P41146 370 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 MAGEA2P43356 314 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 KLRD1Q13241 179 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 CRIP3Q6Q6R5 217 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 OR51G2Q8NGK0 314 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 OR4C13Q8NGP0 309 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 OR2T6Q8NHC8 308 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 RPL3LQ92901 407 aaKnown RBP11.41□□□□□ -0.58
VMP1-209ENST00000588915 DUS3LQ96G46 650 aaKnown RBP11.41□□□□□ -0.58
VMP1-209ENST00000588915 PGAM5Q96HS1 289 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 DGCR6LQ9BY27 220 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 PPP1R3EQ9H7J1 279 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 CMC2Q9NRP2 79 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 SNTG1Q9NSN8 517 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 NLKQ9UBE8 527 aa11.41□□□□□ -0.58
VMP1-209ENST00000588915 A0A1W2PRD5 423 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 A0A1W2PRF3 423 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 A0A1W2PRM7 423 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 OR2AT4A6NND4 320 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 ZNF850A8MQ14 1090 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 H3BUX3 64 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 PLXNB1O43157 2135 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 AKR7A2O43488 359 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 GLCEO94923 617 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 H2BFMP0C1H6 154 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 CLUP10909 449 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 SELLP14151 372 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 GLRA1P23415 457 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 GSTT1P30711 240 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 EMX1Q04741 257 aaPredicted RBP11.4□□□□□ -0.58
VMP1-209ENST00000588915 PRDX4Q13162 271 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 LRRC75BQ2VPJ9 315 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 HSP90B2PQ58FF3 399 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 CD300LDQ6UXZ3 194 aa11.4□□□□□ -0.58
VMP1-209ENST00000588915 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms