RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PAPOLGQ9BWT3 736 aaKnown RBP9.65□□□□□ -0.86
BRCA1-225ENST00000586385 DNTTIP1Q9H147 329 aa9.65□□□□□ -0.86
BRCA1-225ENST00000586385 MEGF9Q9H1U4 602 aa9.65□□□□□ -0.86
BRCA1-225ENST00000586385 ZNF702PQ9H963 129 aa9.65□□□□□ -0.86
BRCA1-225ENST00000586385 VIPAS39Q9H9C1 493 aa9.65□□□□□ -0.86
BRCA1-225ENST00000586385 EFCAB1Q9HAE3 211 aa9.65□□□□□ -0.86
BRCA1-225ENST00000586385 SERTAD4Q9NUC0 356 aa9.65□□□□□ -0.86
BRCA1-225ENST00000586385 SLC25A10Q9UBX3 287 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-225ENST00000586385 CD300AQ9UGN4 299 aa9.65□□□□□ -0.86
BRCA1-225ENST00000586385 ZNF222Q9UK12 451 aa9.65□□□□□ -0.86
BRCA1-225ENST00000586385 SAMD4AQ9UPU9 718 aaKnown RBP9.65□□□□□ -0.86
BRCA1-225ENST00000586385 IGKV1D-17A0A075B6S4 117 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 ACAA1P09110 424 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-225ENST00000586385 CD28P10747 220 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 SPI1P17947 270 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 RRM2P31350 389 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 NAA10P41227 235 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-225ENST00000586385 CAV3P56539 151 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 ZNF121P58317 390 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-225ENST00000586385 SMIM11AP58511 58 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 HABP2Q14520 560 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-225ENST00000586385 KRT72Q14CN4 511 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 TIGD6Q17RP2 521 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 FAM76BQ5HYJ3 339 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 NCR3LG1Q68D85 454 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 FAM57BQ71RH2 274 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 HDXQ7Z353 690 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 DYNAPQ8N1N2 210 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 OR9Q2Q8NGE9 314 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 OR4C15Q8NGM1 316 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 OR4C13Q8NGP0 309 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 OR10Z1Q8NGY1 313 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 OR4Q3Q8NH05 313 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 GNPDA2Q8TDQ7 276 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 RNF133Q8WVZ7 376 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 OR5P3Q8WZ94 311 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 PPP1R14AQ96A00 147 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 PHF21AQ96BD5 680 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 PYURFQ96I23 114 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 LYZL4Q96KX0 146 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 MMP28Q9H239 520 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 RANBP3Q9H6Z4 567 aaPredicted RBP9.64□□□□□ -0.87
BRCA1-225ENST00000586385 GORASP2Q9H8Y8 452 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 IL20Q9NYY1 176 aa9.64□□□□□ -0.87
BRCA1-225ENST00000586385 RYR3Q15413 4870 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 ANGPTL7O43827 346 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 RHBDL1O75783 438 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 ANXA2P07355 339 aaKnown RBP9.63□□□□□ -0.87
BRCA1-225ENST00000586385 VSIG10L2P0DP72 767 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 NDUFB7P17568 137 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 FMO3P31513 532 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 OPRL1P41146 370 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 BMXP51813 675 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 SLC25A1P53007 311 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 ERVFRD-1P60508 538 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 GRB2P62993 217 aaKnown RBP9.63□□□□□ -0.87
BRCA1-225ENST00000586385 PRDX4Q13162 271 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 TAF13Q15543 124 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 AANATQ16613 207 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 LRRC75BQ2VPJ9 315 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 NSUN5P1Q3KNT7 163 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 C11orf88Q6PI97 169 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 CCBE1Q6UXH8 406 aaPredicted RBP9.63□□□□□ -0.87
BRCA1-225ENST00000586385 MKXQ8IYA7 352 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 Q8N2B8 174 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 ZNRF1Q8ND25 227 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 OR51G2Q8NGK0 314 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 OR2T6Q8NHC8 308 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 ABHD6Q9BV23 337 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 SP140LQ9H930 580 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 C19orf12Q9NSK7 152 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 NECAP2Q9NVZ3 263 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 DNAJC27Q9NZQ0 273 aa9.63□□□□□ -0.87
BRCA1-225ENST00000586385 SF3B6Q9Y3B4 125 aaKnown RBP9.63□□□□□ -0.87
BRCA1-225ENST00000586385 A0A1W2PQ09 198 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 NKX6-3A6NJ46 265 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 OR2AT4A6NND4 320 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 ZNF850A8MQ14 1090 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 NDUFAB1O14561 156 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 PSG2P11465 335 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 H2AFXP16104 143 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-225ENST00000586385 MSX2P35548 267 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-225ENST00000586385 HMGA2P52926 109 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 EIF2B1Q14232 305 aaKnown RBP9.62□□□□□ -0.87
BRCA1-225ENST00000586385 GFOD2Q3B7J2 385 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 LDLRAD2Q5SZI1 272 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 RASSF6Q6ZTQ3 369 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 CSNK2A3Q8NEV1 391 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 MED30Q96HR3 178 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 CITED2Q99967 270 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-225ENST00000586385 MICU1Q9BPX6 476 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 RTL8AQ9BWD3 113 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 SPAG4Q9NPE6 437 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 IL1RAPQ9NPH3 570 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 BRD7Q9NPI1 651 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 NLKQ9UBE8 527 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 LYVE1Q9Y5Y7 322 aa9.62□□□□□ -0.87
BRCA1-225ENST00000586385 TMEM210A6NLX4 147 aa9.61□□□□□ -0.87
BRCA1-225ENST00000586385 FBXO24O75426 580 aa9.61□□□□□ -0.87
BRCA1-225ENST00000586385 CST4P01036 141 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms