RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 RAB43Q86YS6 212 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 APOBEC3FQ8IUX4 373 aaKnown RBP2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 KIR2DL5AQ8N109 375 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 OR6V1Q8N148 313 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 LRRC52Q8N7C0 313 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 Q8N9G6 341 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 ATP6V1C2Q8NEY4 427 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 OR4F15Q8NGB8 312 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 OR10G3Q8NGC4 313 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 OR10K1Q8NGX5 313 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 KIR2DL5BQ8NHK3 375 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 LINC01006Q8NI28 216 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 ZNF564Q8TBZ8 553 aaPredicted RBP2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 RDH11Q8TC12 318 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 GPR151Q8TDV0 419 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 BAALCQ8WXS3 180 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 TMEM203Q969S6 136 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 MYLPFQ96A32 169 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 TESCQ96BS2 214 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 OR10C1Q96KK4 312 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 FOPNLQ96NB1 174 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 HBEGFQ99075 208 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 FAM173AQ9BQD7 235 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 FUNDC2Q9BWH2 189 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 MND1Q9BWT6 205 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 ARV1Q9H2C2 271 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 PPA2Q9H2U2 334 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 MIXL1Q9H2W2 232 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 TMEM27Q9HBJ8 222 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 WFDC1Q9HC57 220 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 C6orf50Q9HD87 102 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 BIN3Q9NQY0 253 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 AGPAT4Q9NRZ5 378 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 MIOXQ9UGB7 285 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 FBXO5Q9UKT4 447 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 HHLA2Q9UM44 414 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 FARSAQ9Y285 508 aaKnown RBP2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 A2MP01023 1474 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 NCOA1Q15788 1441 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 SMG6Q86US8 1419 aaKnown RBP2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 PTPRUQ92729 1446 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 RIMS2Q9UQ26 1411 aa2.76□□□□□ -1.97
TRAPPC8-205ENST00000578658 CAMSAP1Q5T5Y3 1602 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 ANKRD36BQ8N2N9 1353 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 USP47Q96K76 1375 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 PCF11O94913 1555 aaKnown RBP2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 PRORSD1PA6NEY8 169 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 CCDC182A6NF36 153 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 SMIM9A6NGZ8 99 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 F5H768 121 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 H3BTX0 84 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 CASKO14936 926 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 UBDO15205 165 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 RAD1O60671 282 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 SHOX2O60902 331 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 OR2J2O76002 312 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 FAM107AO95990 144 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 MT-ND4P03905 459 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 WNT2P09544 360 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 OR10J4P0C629 311 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 HIST1H1EP10412 219 aaKnown RBP2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 ZNF17P17021 662 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 SERPINA2P20848 420 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 ATP6V1B2P21281 511 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 PSMA1P25786 263 aaKnown RBP2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 PAX6P26367 422 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 LOXP28300 417 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 TNFSF9P41273 254 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 AKR1C3P42330 323 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 RBM34P42696 430 aaKnown RBP2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 P2RY1P47900 373 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 PSMD8P48556 350 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 CX3CR1P49238 355 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 DAP3P51398 398 aaKnown RBP2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 EFNA3P52797 238 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 OR2B8PP59922 312 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 RPS20P60866 119 aaKnown RBP2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 RPS4XP62701 263 aaKnown RBP2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 HMGCS1Q01581 520 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 TLE4Q04727 773 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 KLRB1Q12918 225 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 PRPSAP1Q14558 356 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 MAD2L1BPQ15013 274 aaPredicted RBP2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 CD226Q15762 336 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 MPPED2Q15777 294 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 SMIM21Q3B7S5 101 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 ZBED5Q49AG3 693 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 SPIN4Q56A73 249 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 RNASE10Q5GAN6 216 aaKnown RBP2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 OR2B11Q5JQS5 317 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 ACTL10Q5JWF8 245 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 C1orf220Q5T0J3 134 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 UBE2UQ5VVX9 321 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 PRR5LQ6MZQ0 368 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 CDC42EP5Q6NZY7 148 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 ENPP6Q6UWR7 440 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 TMEM184AQ6ZMB5 413 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 ADAMTSL5Q6ZMM2 481 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 CYS1Q717R9 158 aa2.75□□□□□ -1.97
TRAPPC8-205ENST00000578658 MOB3BQ86TA1 216 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms