RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 DXOO77932 396 aaKnown RBP12.08□□□□□ -0.47
NDEL1-204ENST00000578172 CCL4P13236 92 aa12.08□□□□□ -0.47
NDEL1-204ENST00000578172 GLB1P16278 677 aa12.08□□□□□ -0.47
NDEL1-204ENST00000578172 CPT2P23786 658 aa12.08□□□□□ -0.47
NDEL1-204ENST00000578172 PSMB6P28072 239 aa12.08□□□□□ -0.47
NDEL1-204ENST00000578172 TLE1Q04724 770 aa12.08□□□□□ -0.47
NDEL1-204ENST00000578172 MEF2DQ14814 521 aa12.08□□□□□ -0.47
NDEL1-204ENST00000578172 RSU1Q15404 277 aa12.08□□□□□ -0.47
NDEL1-204ENST00000578172 TMEM229BQ8NBD8 167 aa12.08□□□□□ -0.47
NDEL1-204ENST00000578172 HSD17B11Q8NBQ5 300 aa12.08□□□□□ -0.47
NDEL1-204ENST00000578172 OR5L1Q8NGL2 311 aa12.08□□□□□ -0.47
NDEL1-204ENST00000578172 OR5M8Q8NGP6 311 aa12.08□□□□□ -0.47
NDEL1-204ENST00000578172 MSGN1A6NI15 193 aa12.08□□□□□ -0.48
NDEL1-204ENST00000578172 B4GALT1P15291 398 aa12.08□□□□□ -0.48
NDEL1-204ENST00000578172 NXPH1P58417 271 aa12.08□□□□□ -0.48
NDEL1-204ENST00000578172 C5orf24Q7Z6I8 188 aa12.08□□□□□ -0.48
NDEL1-204ENST00000578172 ZNF837Q96EG3 531 aaPredicted RBP12.08□□□□□ -0.48
NDEL1-204ENST00000578172 ZNF629Q9UEG4 869 aaPredicted RBP12.08□□□□□ -0.48
NDEL1-204ENST00000578172 MRPS17Q9Y2R5 130 aaKnown RBP12.08□□□□□ -0.48
NDEL1-204ENST00000578172 PCNX1Q96RV3 2341 aa12.08□□□□□ -0.48
NDEL1-204ENST00000578172 EFNA2O43921 213 aa12.08□□□□□ -0.48
NDEL1-204ENST00000578172 TSPAN15O95858 294 aa12.08□□□□□ -0.48
NDEL1-204ENST00000578172 KLK3P07288 261 aaPredicted RBP12.08□□□□□ -0.48
NDEL1-204ENST00000578172 HOXD4P09016 255 aaPredicted RBP12.08□□□□□ -0.48
NDEL1-204ENST00000578172 OGFOD3Q6PK18 319 aa12.08□□□□□ -0.48
NDEL1-204ENST00000578172 OR5L2Q8NGL0 311 aa12.08□□□□□ -0.48
NDEL1-204ENST00000578172 ZNF501Q96CX3 271 aaPredicted RBP12.08□□□□□ -0.48
NDEL1-204ENST00000578172 OR10A2Q9H208 303 aa12.08□□□□□ -0.48
NDEL1-204ENST00000578172 ZNF442Q9H7R0 627 aa12.08□□□□□ -0.48
NDEL1-204ENST00000578172 A0A096LPE4 126 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 A0A1W2PPZ6 126 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 OR7C1O76099 320 aaPredicted RBP12.07□□□□□ -0.48
NDEL1-204ENST00000578172 OR2A4O95047 310 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 MGMTP16455 207 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 RPS27AP62979 156 aaKnown RBP12.07□□□□□ -0.48
NDEL1-204ENST00000578172 UBA52P62987 128 aaKnown RBP12.07□□□□□ -0.48
NDEL1-204ENST00000578172 SRSF3P84103 164 aaKnown RBP12.07□□□□□ -0.48
NDEL1-204ENST00000578172 ACOT7LQ6ZUV0 252 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 OR2A7Q96R45 310 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 ZNF2Q9BSG1 426 aaPredicted RBP12.07□□□□□ -0.48
NDEL1-204ENST00000578172 FAAP24Q9BTP7 215 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 EXOSC3Q9NQT5 275 aaKnown RBP12.07□□□□□ -0.48
NDEL1-204ENST00000578172 OR5AC2Q9NZP5 309 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 ZNF581Q9P0T4 197 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 PUS1Q9Y606 427 aaKnown RBP eCLIP12.07□□□□□ -0.48
NDEL1-204ENST00000578172 MFSD2BA6NFX1 497 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 NME2P1O60361 137 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 NFYBP25208 207 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 CXCL12P48061 93 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 TCTEX1D2Q8WW35 142 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 SULT4A1Q9BR01 284 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 PAPOLGQ9BWT3 736 aaKnown RBP12.07□□□□□ -0.48
NDEL1-204ENST00000578172 OR6C76A6NM76 312 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 TPT1P13693 172 aaKnown RBP12.07□□□□□ -0.48
NDEL1-204ENST00000578172 CBX5P45973 191 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 GABRA4P48169 554 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 ISXQ2M1V0 245 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 DRAM2Q6UX65 266 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 SEMA6DQ8NFY4 1073 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 CCDC74BQ96LY2 380 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 MYOTQ9UBF9 498 aa12.07□□□□□ -0.48
NDEL1-204ENST00000578172 RBM7Q9Y580 266 aaKnown RBP12.07□□□□□ -0.48
NDEL1-204ENST00000578172 A0A0D9SG52 128 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 LIPT2A6NK58 231 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 BET1O15155 118 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 LRP3O75074 770 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 RAD51DO75771 328 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 SRFP11831 508 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 DAOP14920 347 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 CNR1P21554 472 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 DEFA6Q01524 100 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 PCK2Q16822 640 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 P4HA3Q7Z4N8 544 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 WDSUB1Q8N9V3 476 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 APCDD1LQ8NCL9 501 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 SLAMF9Q96A28 289 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 ZMAT5Q9UDW3 170 aaKnown RBP12.06□□□□□ -0.48
NDEL1-204ENST00000578172 LHFPL6Q9Y693 200 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 ITGB2P05107 769 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 APOBEC1P41238 236 aaKnown RBP12.06□□□□□ -0.48
NDEL1-204ENST00000578172 KISS1Q15726 138 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 MRPS24Q96EL2 167 aaKnown RBP12.06□□□□□ -0.48
NDEL1-204ENST00000578172 ZNF845Q96IR2 970 aaPredicted RBP12.06□□□□□ -0.48
NDEL1-204ENST00000578172 RSRP1Q9BUV0 290 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 PRRG4Q9BZD6 226 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 TRBV23-1A0A0A0MS06 115 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 NOVA1P51513 510 aaKnown RBP12.06□□□□□ -0.48
NDEL1-204ENST00000578172 SMAD4Q13485 552 aaKnown RBP12.06□□□□□ -0.48
NDEL1-204ENST00000578172 TSC22D1Q15714 1073 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 KCNRGQ8N5I3 272 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 THRSPQ92748 146 aa12.06□□□□□ -0.48
NDEL1-204ENST00000578172 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.06□□□□□ -0.48
NDEL1-204ENST00000578172 NQO2P16083 231 aa12.05□□□□□ -0.48
NDEL1-204ENST00000578172 ZNF16P17020 682 aaPredicted RBP12.05□□□□□ -0.48
NDEL1-204ENST00000578172 CAV2P51636 162 aa12.05□□□□□ -0.48
NDEL1-204ENST00000578172 ZNF260Q3ZCT1 412 aa12.05□□□□□ -0.48
NDEL1-204ENST00000578172 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
NDEL1-204ENST00000578172 RPL7L1Q6DKI1 246 aaKnown RBP12.05□□□□□ -0.48
NDEL1-204ENST00000578172 CLEC18BQ6UXF7 455 aa12.05□□□□□ -0.48
NDEL1-204ENST00000578172 PAQR4Q8N4S7 273 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms