RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 RTL8AQ9BWD3 113 aa12.32□□□□□ -0.44
NPLOC4-218ENST00000574964 ACOT13Q9NPJ3 140 aa12.32□□□□□ -0.44
NPLOC4-218ENST00000574964 GPR173Q9NS66 373 aa12.32□□□□□ -0.44
NPLOC4-218ENST00000574964 LSM2Q9Y333 95 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-218ENST00000574964 CREBBPQ92793 2442 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 IGHV1-69-2A0A0G2JMI3 117 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 ANKRD61A6NGH8 418 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 A6NLC8 198 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 PLPP2O43688 288 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 LMX1BO60663 402 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 GRPP07492 148 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 CSF3P09919 207 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 CD200P41217 278 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 SOX2P48431 317 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 EMX1Q04741 257 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 MLLT11Q13015 90 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 CLEC12BQ2HXU8 276 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 HFEQ30201 348 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 CEP78Q5JTW2 689 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 Q6ZSR3 168 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 SPARTQ8N0X7 666 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 OR51A4Q8NGJ6 313 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 RPS4Y2Q8TD47 263 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 FCGR1BQ92637 280 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 C10orf35Q96D05 121 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 MGLLQ99685 303 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 ISYNA1Q9NPH2 558 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 DLL4Q9NR61 685 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 ZNF275Q9NSD4 429 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 TREM2Q9NZC2 230 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 SLC7A11Q9UPY5 501 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 PPP1R3CQ9UQK1 317 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 SETXQ7Z333 2677 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 MYO9AB2RTY4 2548 aa12.31□□□□□ -0.44
NPLOC4-218ENST00000574964 A0A087WXM4 84 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 A0A1B0GWJ7 208 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 CYSRT1A8MQ03 144 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 LYNX1G3V0Z9 82 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 LYNX1P0DP58 116 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 IRF2P14316 349 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 COL8A2P25067 703 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 CRYBB2P43320 205 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 DSCR9P59020 149 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 YIF1BQ5BJH7 314 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 PRAMEF6Q5VXH4 476 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 LIPKQ5VXJ0 399 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 PRSS57Q6UWY2 283 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 ZNF525Q8N782 197 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 CELF2-AS1Q8N7Q2 184 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 OR11L1Q8NGX0 322 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 PP6455Q8WZ26 134 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 FAM168AQ92567 244 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 CCL17Q92583 94 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 ITPKCQ96DU7 683 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 NR1H4Q96RI1 486 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 PPP1R3EQ9H7J1 279 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 VCX3AQ9NNX9 186 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 UFSP2Q9NUQ7 469 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 DOCK11Q5JSL3 2073 aa12.3□□□□□ -0.44
NPLOC4-218ENST00000574964 ZNF732B4DXR9 585 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 CD1AP06126 327 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 PSMB9P28065 219 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 GNG3P63215 75 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 MRPS11P82912 194 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 MAB21L1Q13394 359 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 GPR50Q13585 617 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 CNN3Q15417 329 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 CEACAM21Q3KPI0 293 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 SPRNQ5BIV9 151 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 ARMCX4Q5H9R4 360 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 DMRTC1Q5HYR2 192 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 MOGAT3Q86VF5 341 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 MS4A15Q8N5U1 240 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 TSPAN14Q8NG11 270 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 OR5A2Q8NGI9 324 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 OR13C5Q8NGS8 318 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 TRMT10AQ8TBZ6 339 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 OR5P3Q8WZ94 311 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 RGP1Q92546 391 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 ADAT3Q96EY9 351 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 PGLYRP3Q96LB9 341 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 TECTBQ96PL2 329 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 TMED9Q9BVK6 235 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 CHST5Q9GZS9 411 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 CHODLQ9H9P2 273 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 FN3KRPQ9HA64 309 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 NEK6Q9HC98 313 aa12.29□□□□□ -0.44
NPLOC4-218ENST00000574964 PDZD2O15018 2839 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 FAM230AA0A1W2PPH8 454 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 hCG_1807616A0A1W2PRN6 198 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 OR5B21A6NL26 309 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 TMEM210A6NLX4 147 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 LRRC30A6NM36 301 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 ATF1P18846 271 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 GPM6AP51674 278 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 TPBGQ13641 420 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 DOC2BQ14184 412 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 NEDD8Q15843 81 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 Q499Y3 187 aa12.28□□□□□ -0.44
NPLOC4-218ENST00000574964 TMEM42Q69YG0 159 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms