RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TMEM236Q5W0B7 351 aa10.26□□□□□ -0.77
CTDNEP1-205ENST00000570828 BRD3OSQ6XYD6 125 aa10.26□□□□□ -0.77
CTDNEP1-205ENST00000570828 KRT77Q7Z794 578 aa10.26□□□□□ -0.77
CTDNEP1-205ENST00000570828 GALNT4Q8N4A0 578 aa10.26□□□□□ -0.77
CTDNEP1-205ENST00000570828 ST8SIA4Q92187 359 aa10.26□□□□□ -0.77
CTDNEP1-205ENST00000570828 NRBF2Q96F24 287 aa10.26□□□□□ -0.77
CTDNEP1-205ENST00000570828 C1orf147Q96MC9 270 aaPredicted RBP10.26□□□□□ -0.77
CTDNEP1-205ENST00000570828 TVP23BQ9NYZ1 205 aa10.26□□□□□ -0.77
CTDNEP1-205ENST00000570828 KLHDC2Q9Y2U9 406 aa10.26□□□□□ -0.77
CTDNEP1-205ENST00000570828 LRP12Q9Y561 859 aa10.26□□□□□ -0.77
CTDNEP1-205ENST00000570828 MPC1Q9Y5U8 109 aa10.26□□□□□ -0.77
CTDNEP1-205ENST00000570828 ZNF879B4DU55 563 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 P2RY10O00398 339 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 DVL1O14640 695 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 TOX4O94842 621 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 SFTPBP07988 381 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 MRPL3P09001 348 aaKnown RBP10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 ACKR3P25106 362 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 CRISP1P54107 249 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 BPIFB3P59826 476 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 PRDX4Q13162 271 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 DOC2BQ14184 412 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 SLC9A3R2Q15599 337 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 C11orf91Q3C1V1 193 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 LCE3BQ5TA77 95 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 KCTD18Q6PI47 426 aaPredicted RBP10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 WDR82Q6UXN9 313 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 KCTD8Q6ZWB6 473 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 SLC36A1Q7Z2H8 476 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 COMMD2Q86X83 199 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 OR8B12Q8NGG6 310 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 FAM81AQ8TBF8 368 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 YIPF3Q9GZM5 350 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 KAAG1Q9UBP8 84 aa10.25□□□□□ -0.77
CTDNEP1-205ENST00000570828 MDFIC2A0A1B0GVS7 189 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 TMEM210A6NLX4 147 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 ZNF850A8MQ14 1090 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 CDIPTO14735 213 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 TNFRSF13BO14836 293 aaPredicted RBP10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 ECDO95905 644 aaPredicted RBP10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 CST4P01036 141 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 ALOX5APP20292 161 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 ESRRGP62508 458 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 DEFB112Q30KQ8 113 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 WDR38Q5JTN6 314 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 FAHD1Q6P587 224 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 BTN2A1Q7KYR7 527 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 C11orf53Q8IXP5 236 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 ZDHHC23Q8IYP9 409 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 SGMS2Q8NHU3 365 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 GATAD2BQ8WXI9 593 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 PIGCQ92535 297 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 C12orf43Q96C57 262 aaKnown RBP10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 WDFY2Q96P53 400 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 HIST1H2AAQ96QV6 131 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 CCL13Q99616 98 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 PKP2Q99959 881 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 CADM1Q9BY67 442 aaKnown RBP10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 MROQ9BYG7 248 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 TLNRD1Q9H1K6 362 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 RASSF4Q9H2L5 321 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 PPP1R3EQ9H7J1 279 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 KRT84Q9NSB2 600 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 FAM53CQ9NYF3 392 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 DNAJB11Q9UBS4 358 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 SOX21Q9Y651 276 aaPredicted RBP10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 TMEM14AQ9Y6G1 99 aa10.24□□□□□ -0.77
CTDNEP1-205ENST00000570828 TMEM269A0A1B0GVZ9 245 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 CCDC182A6NF36 153 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 NKX6-3A6NJ46 265 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 ACOD1A6NK06 481 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 SRRM5B3KS81 715 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 GSC2O15499 205 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 HOXA3O43365 443 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 MMP9P14780 707 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 RASSF2P50749 326 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 DAPP51397 102 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 HCCSP53701 268 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 GMFBP60983 142 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 PDCD1Q15116 288 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 PTGES3Q15185 160 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 ZNF829Q3KNS6 432 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 RUSC1-AS1Q66K80 236 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 DEGS2Q6QHC5 323 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 FAM216BQ8N7L0 139 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 OR5K1Q8NHB7 308 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 HPSE2Q8WWQ2 592 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 ASB17Q8WXJ9 295 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 OR5P3Q8WZ94 311 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 RPL3LQ92901 407 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 UTP4Q969X6 686 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 RNF170Q96K19 258 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 LYZL4Q96KX0 146 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 TBX15Q96SF7 602 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 CNN2Q99439 309 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 TEAD3Q99594 435 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 RPUSD1Q9UJJ7 312 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 IKZF2Q9UKS7 526 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 PCDHGB1Q9Y5G3 927 aa10.23□□□□□ -0.77
CTDNEP1-205ENST00000570828 MGAM2Q2M2H8 2515 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms