RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 OR5P3Q8WZ94 311 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 RPL3LQ92901 407 aaKnown RBP15.11■□□□□ 0.01
USB1-213ENST00000566292 MICU1Q9BPX6 476 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 SLITRK2Q9H156 845 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 CNTD2Q9H8S5 307 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 ZNF556Q9HAH1 456 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 MMP24Q9Y5R2 645 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 MPC1Q9Y5U8 109 aa15.11■□□□□ 0.01
USB1-213ENST00000566292 CST4P01036 141 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 ALOX5APP20292 161 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 CBX1P83916 185 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 RELBQ01201 579 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 SNCBQ16143 134 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 STUMQ69YW2 141 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 SPATA24Q86W54 205 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 FTMTQ8N4E7 242 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 TMEM86BQ8N661 226 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 HPSE2Q8WWQ2 592 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 C12orf43Q96C57 262 aaKnown RBP15.1■□□□□ 0.01
USB1-213ENST00000566292 FAM71F1Q96KD3 344 aaPredicted RBP15.1■□□□□ 0.01
USB1-213ENST00000566292 PKP2Q99959 881 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 RTL8AQ9BWD3 113 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 WDR13Q9H1Z4 485 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 SLC25A19Q9HC21 320 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 LRP12Q9Y561 859 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 KPTNQ9Y664 436 aa15.1■□□□□ 0.01
USB1-213ENST00000566292 TCRBV3S1A0A5B6 114 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 FKBP6O75344 327 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 ANXA8P13928 327 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 SELLP14151 372 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 HOXB6P17509 224 aaKnown RBP15.09■□□□□ 0.01
USB1-213ENST00000566292 TGM4P49221 684 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 GMFBP60983 142 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 RPS7P62081 194 aaKnown RBP15.09■□□□□ 0.01
USB1-213ENST00000566292 APOFQ13790 326 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 FLOT2Q14254 428 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 CDONQ4KMG0 1287 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 FAM76BQ5HYJ3 339 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 ATPAF1Q5TC12 328 aaPredicted RBP15.09■□□□□ 0.01
USB1-213ENST00000566292 SLC36A1Q7Z2H8 476 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 TRPM8Q7Z2W7 1104 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 VMO1Q7Z5L0 202 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 PDZD9Q8IXQ8 264 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 SCCPDHQ8NBX0 429 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 PAPD5Q8NDF8 572 aaKnown RBP15.09■□□□□ 0.01
USB1-213ENST00000566292 OR5T2Q8NGG2 359 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 OR10Z1Q8NGY1 313 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 PIGCQ92535 297 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 NIPAL2Q9H841 368 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 SNTG1Q9NSN8 517 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 HAO2Q9NYQ3 351 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 C1RLQ9NZP8 487 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 DNAJB9Q9UBS3 223 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 LAMP5Q9UJQ1 280 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 POMT1Q9Y6A1 747 aa15.09■□□□□ 0.01
USB1-213ENST00000566292 A0A0U1RQK1 487 aa15.08■□□□□ 0
USB1-213ENST00000566292 CCDC182A6NF36 153 aa15.08■□□□□ 0
USB1-213ENST00000566292 TMEM210A6NLX4 147 aa15.08■□□□□ 0
USB1-213ENST00000566292 PRR32B1ATL7 298 aa15.08■□□□□ 0
USB1-213ENST00000566292 TFF1P04155 84 aa15.08■□□□□ 0
USB1-213ENST00000566292 DCTDP32321 178 aa15.08■□□□□ 0
USB1-213ENST00000566292 RAG2P55895 527 aa15.08■□□□□ 0
USB1-213ENST00000566292 IKZF1Q13422 519 aa15.08■□□□□ 0
USB1-213ENST00000566292 KRT77Q7Z794 578 aa15.08■□□□□ 0
USB1-213ENST00000566292 PIP4P2Q8N4L2 257 aa15.08■□□□□ 0
USB1-213ENST00000566292 SSMEM1Q8WWF3 244 aa15.08■□□□□ 0
USB1-213ENST00000566292 SLC7A6OSQ96CW6 309 aaPredicted RBP15.08■□□□□ 0
USB1-213ENST00000566292 RNF170Q96K19 258 aa15.08■□□□□ 0
USB1-213ENST00000566292 RAB3IPQ96QF0 476 aaPredicted RBP15.08■□□□□ 0
USB1-213ENST00000566292 ABCB9Q9NP78 766 aa15.08■□□□□ 0
USB1-213ENST00000566292 ONECUT1Q9UBC0 465 aa15.08■□□□□ 0
USB1-213ENST00000566292 ZNF391Q9UJN7 358 aa15.08■□□□□ 0
USB1-213ENST00000566292 PSMD9O00233 223 aa15.07■□□□□ 0
USB1-213ENST00000566292 GYG2O15488 501 aa15.07■□□□□ 0
USB1-213ENST00000566292 AKR7A2O43488 359 aa15.07■□□□□ 0
USB1-213ENST00000566292 NDUFB3O43676 98 aa15.07■□□□□ 0
USB1-213ENST00000566292 PRB3Q04118 309 aaPredicted RBP15.07■□□□□ 0
USB1-213ENST00000566292 SRSF4Q08170 494 aaKnown RBP15.07■□□□□ 0
USB1-213ENST00000566292 SNAPC1Q16533 368 aa15.07■□□□□ 0
USB1-213ENST00000566292 DNAL1Q4LDG9 190 aa15.07■□□□□ 0
USB1-213ENST00000566292 KCTD8Q6ZWB6 473 aa15.07■□□□□ 0
USB1-213ENST00000566292 LDLRAD3Q86YD5 345 aa15.07■□□□□ 0
USB1-213ENST00000566292 ZDHHC23Q8IYP9 409 aa15.07■□□□□ 0
USB1-213ENST00000566292 KIR3DL3Q8N743 410 aa15.07■□□□□ 0
USB1-213ENST00000566292 WFDC12Q8WWY7 111 aa15.07■□□□□ 0
USB1-213ENST00000566292 GAFA1Q96PS6 74 aa15.07■□□□□ 0
USB1-213ENST00000566292 TEAD3Q99594 435 aa15.07■□□□□ 0
USB1-213ENST00000566292 DCTN5Q9BTE1 182 aa15.07■□□□□ 0
USB1-213ENST00000566292 YIPF3Q9GZM5 350 aa15.07■□□□□ 0
USB1-213ENST00000566292 DNTTIP1Q9H147 329 aa15.07■□□□□ 0
USB1-213ENST00000566292 YY1AP1Q9H869 796 aa15.07■□□□□ 0
USB1-213ENST00000566292 FAM206AQ9NX38 181 aa15.07■□□□□ 0
USB1-213ENST00000566292 TVP23BQ9NYZ1 205 aa15.07■□□□□ 0
USB1-213ENST00000566292 DNAJB11Q9UBS4 358 aa15.07■□□□□ 0
USB1-213ENST00000566292 POMPQ9Y244 141 aa15.07■□□□□ 0
USB1-213ENST00000566292 A0A1B0GUS0 222 aa15.06■□□□□ 0
USB1-213ENST00000566292 A0A1B0GVI7 797 aa15.06■□□□□ 0
USB1-213ENST00000566292 GPR37O15354 613 aa15.06■□□□□ 0
USB1-213ENST00000566292 NDUFA7O95182 113 aa15.06■□□□□ 0
USB1-213ENST00000566292 IGHV4-59P01825 116 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms