RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 FGGYQ96C11 551 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 MEGF10Q96KG7 1140 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 OPALINQ96PE5 141 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 TECTBQ96PL2 329 aa15.98■□□□□ 0.15
RAB40C-207ENST00000563109 MYOZ1Q9NP98 299 aaPredicted RBP15.98■□□□□ 0.15
RAB40C-207ENST00000563109 A6NIN4 97 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 NDUFS7O75251 213 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 HPXP02790 462 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 DAOP14920 347 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 CPEP16870 476 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 SOX2P48431 317 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 TPBGQ13641 420 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 CNN3Q15417 329 aaKnown RBP15.97■□□□□ 0.15
RAB40C-207ENST00000563109 TRAM1Q15629 374 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 NEDD8Q15843 81 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 ARMCX4Q5H9R4 360 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 CEP78Q5JTW2 689 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 TMEM42Q69YG0 159 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 KCTD8Q6ZWB6 473 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 KRT74Q7RTS7 529 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 MS4A15Q8N5U1 240 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 UBASH3BQ8TF42 649 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 TMED9Q9BVK6 235 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 CHST5Q9GZS9 411 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 GPR173Q9NS66 373 aa15.97■□□□□ 0.15
RAB40C-207ENST00000563109 SSX4O60224 188 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 CSF3P09919 207 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 OCMP0CE72 109 aaPredicted RBP15.96■□□□□ 0.15
RAB40C-207ENST00000563109 PSMA1P25786 263 aaKnown RBP15.96■□□□□ 0.15
RAB40C-207ENST00000563109 MAPK3P27361 379 aaPredicted RBP15.96■□□□□ 0.15
RAB40C-207ENST00000563109 MRPS11P82912 194 aaKnown RBP15.96■□□□□ 0.15
RAB40C-207ENST00000563109 CEACAM21Q3KPI0 293 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 Q499Y3 187 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 OR13C5Q8NGS8 318 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 OR5P3Q8WZ94 311 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 RDH5Q92781 318 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 TMEM106AQ96A25 262 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 ITPKCQ96DU7 683 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 ADAT3Q96EY9 351 aaPredicted RBP15.96■□□□□ 0.15
RAB40C-207ENST00000563109 FOXC2Q99958 501 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 NEK6Q9HC98 313 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 SLC7A11Q9UPY5 501 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 TANC2Q9HCD6 1990 aa15.96■□□□□ 0.15
RAB40C-207ENST00000563109 IGHV1-69-2A0A0G2JMI3 117 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 TRBV5-5A0A0J9YX44 114 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 OR5B21A6NL26 309 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 TMEM210A6NLX4 147 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 LY6HO94772 140 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 CARTPTQ16568 116 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 CLEC2AQ6UVW9 174 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 UTS2BQ765I0 119 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 SERPINA12Q8IW75 414 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 PHC2Q8IXK0 858 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 OR5A2Q8NGI9 324 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 HPSE2Q8WWQ2 592 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 RNF170Q96K19 258 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 PPP1R3EQ9H7J1 279 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 DLL4Q9NR61 685 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 CKLFQ9UBR5 152 aa15.95■□□□□ 0.14
RAB40C-207ENST00000563109 CHD3Q12873 2000 aaKnown RBP15.95■□□□□ 0.14
RAB40C-207ENST00000563109 FLNBO75369 2602 aaKnown RBP15.94■□□□□ 0.14
RAB40C-207ENST00000563109 A6NLC8 198 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 INMTO95050 263 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 GRPP07492 148 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 GABRA5P31644 462 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 PDLIM4P50479 330 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 ART1P52961 327 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 GNG3P63215 75 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 MAB21L1Q13394 359 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 HFEQ30201 348 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 Q5PR19 223 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 PRAMEF6Q5VXH4 476 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 PARP16Q8N5Y8 322 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 OR5D14Q8NGL3 314 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 ERGIC1Q969X5 290 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 OR14A2Q96R54 314 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 ZCCHC4Q9H5U6 513 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 FN3KRPQ9HA64 309 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 PPP1R3CQ9UQK1 317 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 SPG11Q96JI7 2443 aa15.94■□□□□ 0.14
RAB40C-207ENST00000563109 USF3Q68DE3 2245 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 IGHV3-64DA0A0J9YX35 117 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 MAGEA13PA6NCF6 341 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 ZNF879B4DU55 563 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 ZNF732B4DXR9 585 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 IFNL4K9M1U5 179 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 CCRL2O00421 344 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 CDC14BO60729 498 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 PRKACBP22694 351 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 CRYBB2P43320 205 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 GATA4P43694 442 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 GPM6AP51674 278 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 DSCR9P59020 149 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 RPS11P62280 158 aaKnown RBP eCLIP15.93■□□□□ 0.14
RAB40C-207ENST00000563109 RPS25P62851 125 aaKnown RBP15.93■□□□□ 0.14
RAB40C-207ENST00000563109 PPP3R1P63098 170 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 SHEQ5VZ18 495 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 MOGAT3Q86VF5 341 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 ZNF525Q8N782 197 aa15.93■□□□□ 0.14
RAB40C-207ENST00000563109 OR13C9Q8NGT0 318 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms