RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ZBTB37Q5TC79 503 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR6S1Q8NH40 331 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 SPAG8Q99932 426 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 CSNK1G1Q9HCP0 422 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 FBLL1A6NHQ2 334 aaKnown RBP12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 CST4P01036 141 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 MMP15P51511 669 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 PRSS42Q7Z5A4 293 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 TEAD3Q99594 435 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 ST3GAL6Q9Y274 331 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 H3BNC9 293 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 YBX1P67809 324 aaKnown RBP12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 TRAT1Q6PIZ9 186 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 WFDC8Q8IUA0 241 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF738Q8NE65 137 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 SRD5A3Q9H8P0 318 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 XRN1Q8IZH2 1706 aaKnown RBP12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZC3H12DA2A288 527 aaKnown RBP12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF195O14628 629 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 P01737 135 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 APCSP02743 223 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 FUT6P51993 359 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 EGLN2Q96KS0 407 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 SLC6A1P30531 599 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 EVX2Q03828 476 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 DNLZQ5SXM8 178 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 ASTLQ6HA08 431 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 FADS6Q8N9I5 356 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 WDR89Q96FK6 387 aaPredicted RBP12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 PIPOXQ9P0Z9 390 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 DOK5Q9P104 306 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 B4DEV8 164 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 RAB29O14966 203 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 IVDP26440 423 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 PRRX1P54821 245 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 SLC38A11Q08AI6 406 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 CIRBPQ14011 172 aaKnown RBP12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 HES3Q5TGS1 186 aa12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF346Q9UL40 294 aaKnown RBP12.54□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZIC5Q96T25 663 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 HSD17B10Q99714 261 aaKnown RBP12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 MYOZ1Q9NP98 299 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 MMP24Q9Y5R2 645 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF324O75467 553 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 CSN3P07498 182 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 CST5P28325 142 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 GAMTQ14353 236 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF841Q6ZN19 808 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 RTL10Q7L3V2 364 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 LILRA2Q8N149 483 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 FBXL14Q8N1E6 418 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 NIPSNAP1Q9BPW8 284 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 TMED3Q9Y3Q3 217 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 A0A1B0GV72 72 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 FZD9O00144 591 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 CSNK1DP48730 415 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 CDC20Q12834 499 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 RGS7BPQ6MZT1 257 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR5M1Q8NGP8 315 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 OR2T10Q8NGZ9 312 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 ARSAP15289 507 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 MRPS21P82921 87 aaKnown RBP12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 TIAL1Q01085 375 aaKnown RBP eCLIP12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 FZD2Q14332 565 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 ZNF766Q5HY98 468 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 Q8IYB0 196 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 BVESQ8NE79 360 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 TBX15Q96SF7 602 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 GABARAPL3Q9BY60 117 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 GLIPR2Q9H4G4 154 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 CST7O76096 145 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 GPANK1O95872 356 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 SMUG1Q53HV7 270 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 FAM24BQ8N5W8 94 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 PBOV1Q9GZY1 135 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 CNTD2Q9H8S5 307 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 LYRM4Q9HD34 91 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 PXDNQ92626 1479 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 C1QTNF6Q9BXI9 259 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 IL17CQ9P0M4 197 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 RBPJLQ9UBG7 517 aa12.53□□□□□ -0.4
CSPG4P12-202ENST00000559989 FUCA1P04066 466 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 HIST1H1EP10412 219 aaKnown RBP12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 HIST1H1CP16403 213 aaKnown RBP12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 RAB32Q13637 225 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 FAM74A3Q4VXF1 159 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 BCDIN3DQ7Z5W3 292 aaKnown RBP12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 ROBO4Q8WZ75 1007 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 EVPLQ92817 2033 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 C7orf72A4D263 438 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 K7ESF4 209 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 IQCF3P0C7M6 154 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 SMIM6P0DI80 62 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 NMUP48645 174 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 COX20Q5RI15 118 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 LIPNQ5VXI9 398 aa12.52□□□□□ -0.4
CSPG4P12-202ENST00000559989 A0A1W2PPC4 97 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 FAM157BP0CG42 384 aa12.52□□□□□ -0.41
CSPG4P12-202ENST00000559989 KIR3DL2P43630 455 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms