RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 METAP1DQ6UB28 335 aaPredicted RBP4.46□□□□□ -1.7
SPG11-220ENST00000559933 TMEM108Q6UXF1 575 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 MEX3BQ6ZN04 569 aaKnown RBP4.46□□□□□ -1.7
SPG11-220ENST00000559933 MRPL21Q7Z2W9 205 aaKnown RBP4.46□□□□□ -1.7
SPG11-220ENST00000559933 CEACAM19Q7Z692 300 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 DPPA2Q7Z7J5 298 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 OR56B2PQ8NGI1 322 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 OR1J1Q8NGS3 322 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 OR13C9Q8NGT0 318 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 OR14K1Q8NGZ2 314 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 SSC4DQ8WTU2 575 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 RFT1Q96AA3 541 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 FGGYQ96C11 551 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 C12orf43Q96C57 262 aaKnown RBP4.46□□□□□ -1.7
SPG11-220ENST00000559933 CYYR1Q96J86 154 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 DERL3Q96Q80 235 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 SPACA5Q96QH8 159 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 SLC30A2Q9BRI3 323 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 MRPL37Q9BZE1 423 aaKnown RBP4.46□□□□□ -1.7
SPG11-220ENST00000559933 COMMD4Q9H0A8 199 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 OR10A2Q9H208 303 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 KCNK15Q9H427 330 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 MOB1AQ9H8S9 216 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 ISYNA1Q9NPH2 558 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 GPR173Q9NS66 373 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 TXNL4BQ9NX01 149 aaKnown RBP4.46□□□□□ -1.7
SPG11-220ENST00000559933 ATPIF1Q9UII2 106 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 ENPP5Q9UJA9 477 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 STUB1Q9UNE7 303 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 PIGLQ9Y2B2 252 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 X6R8D5 127 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 DCHS2Q6V1P9 2916 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 HELZ2Q9BYK8 2649 aaKnown RBP4.46□□□□□ -1.7
SPG11-220ENST00000559933 SPTAN1Q13813 2472 aaKnown RBP4.46□□□□□ -1.7
SPG11-220ENST00000559933 FBN2P35556 2912 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 LRBAP50851 2863 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 TRBV5-7A0A0A0MS05 114 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 IGKV1-9A0A0C4DH69 117 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 A0A1B0GVI7 797 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 A0A1W2PPW3 197 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 CLEC18AA5D8T8 446 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 GGT3PA6NGU5 568 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 ZNF879B4DU55 563 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 E7EQL1 145 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 DHRS3O75911 302 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 CRYAAP02489 173 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 MAS1P04201 325 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 HLA-DPB1P04440 258 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 UBCP0CG48 685 aaKnown RBP4.45□□□□□ -1.7
SPG11-220ENST00000559933 PPP3CBP16298 524 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 ZNF20P17024 532 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 ADRA2CP18825 462 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 ACHEP22303 614 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 CCL1P22362 96 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 PCSK6P29122 969 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 DCTDP32321 178 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 THBS2P35442 1172 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 GNALP38405 381 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 ALDH3B1P43353 468 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 SERPINB10P48595 397 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 FABP6P51161 128 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 CCR9P51686 369 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 UCP2P55851 309 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 NKX6-1P78426 367 aaPredicted RBP4.45□□□□□ -1.7
SPG11-220ENST00000559933 PSG7Q13046 419 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 CCDC58Q4VC31 144 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 ZMAT1Q5H9K5 638 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 STEAP3Q658P3 488 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 CD200R1LQ6Q8B3 271 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 CLEC18BQ6UXF7 455 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 Q6ZR03 302 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 PGAP1Q75T13 922 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 KCTD20Q7Z5Y7 419 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 LRRTM1Q86UE6 522 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 ANKRD13BQ86YJ7 626 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 CCDC36Q8IYA8 594 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 ZCCHC24Q8N2G6 241 aaKnown RBP4.45□□□□□ -1.7
SPG11-220ENST00000559933 CLEC18CQ8NCF0 446 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 OR10AD1Q8NGE0 317 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 TRMT10AQ8TBZ6 339 aaKnown RBP4.45□□□□□ -1.7
SPG11-220ENST00000559933 KLF14Q8TD94 323 aaPredicted RBP4.45□□□□□ -1.7
SPG11-220ENST00000559933 GPR148Q8TDV2 347 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 TMEM171Q8WVE6 324 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 PIGTQ969N2 578 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 TMEM106AQ96A25 262 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 APOBEC3DQ96AK3 386 aaPredicted RBP4.45□□□□□ -1.7
SPG11-220ENST00000559933 CMBLQ96DG6 245 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 MARS2Q96GW9 593 aaKnown RBP4.45□□□□□ -1.7
SPG11-220ENST00000559933 WACQ9BTA9 647 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 DCUN1D5Q9BTE7 237 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 OR10A4Q9H209 315 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 MSL2Q9HCI7 577 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 EIF3KQ9UBQ5 218 aaKnown RBP4.45□□□□□ -1.7
SPG11-220ENST00000559933 NDRG3Q9UGV2 375 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 POU2F3Q9UKI9 436 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 HHLA2Q9UM44 414 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 DHDHQ9UQ10 334 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 RHBDD3Q9Y3P4 386 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 V9GYS6 101 aa4.45□□□□□ -1.7
SPG11-220ENST00000559933 ROS1P08922 2347 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms