RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 VSIG10L2P0DP72 767 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 POU1F1P28069 291 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 FMO3P31513 532 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 SLC15A1P46059 708 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 GSK3AP49840 483 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 GRB2P62993 217 aaKnown RBP13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 BLMHQ13867 455 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 LRRC75BQ2VPJ9 315 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 KLHL12Q53G59 568 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 HCP5Q6MZN7 132 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 CRIP3Q6Q6R5 217 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 ZNF511Q8NB15 262 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 OR52L1Q8NGH7 329 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 OR10Z1Q8NGY1 313 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 DUS3LQ96G46 650 aaKnown RBP13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 AJUBAQ96IF1 538 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 MICU1Q9BPX6 476 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 MEGF9Q9H1U4 602 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 RAB18Q9NP72 206 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 NECAP2Q9NVZ3 263 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 CD300AQ9UGN4 299 aa13.23□□□□□ -0.29
CDC42BPB-205ENST00000559245 DHRS12A0PJE2 317 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 ANXA2P2A6NMY6 339 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 SIGLEC5O15389 551 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 AKR7A2O43488 359 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 ANGPTL7O43827 346 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 GMNNO75496 209 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 SEMG1P04279 462 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 GYPBP06028 91 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 PAX6P26367 422 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 HSD11B1P28845 292 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 CAV3P56539 151 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 PSME3P61289 254 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 MXRA7P84157 204 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 IL5RAQ01344 420 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 GFOD2Q3B7J2 385 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 NSUN5P1Q3KNT7 163 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 TEX30Q5JUR7 227 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 FAM57BQ71RH2 274 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 SLC37A3Q8NCC5 494 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 CSNK2A3Q8NEV1 391 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 OR4S1Q8NGB4 309 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 ANGPTL6Q8NI99 470 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 SGCDQ92629 289 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 RPL3LQ92901 407 aaKnown RBP13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 PYURFQ96I23 114 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 RTL8AQ9BWD3 113 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 SP140LQ9H930 580 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 AURKAIP1Q9NWT8 199 aaPredicted RBP13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 CDH10Q9Y6N8 788 aa13.22□□□□□ -0.29
CDC42BPB-205ENST00000559245 H0YAE9 185 aa13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 ACAA1P09110 424 aaPredicted RBP13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 CFL1P23528 166 aaKnown RBP13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 RRM2P31350 389 aa13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 AANATQ16613 207 aa13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 RPL13AP3Q6NVV1 102 aa13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 PRSS45Q7RTY3 260 aa13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 OR52H1Q8NGJ2 320 aa13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 OR5D13Q8NGL4 314 aa13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 NPFFR1Q9GZQ6 430 aa13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 GORASP2Q9H8Y8 452 aa13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 ELL3Q9HB65 397 aaPredicted RBP13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 DNAJC27Q9NZQ0 273 aa13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 ZNF319Q9P2F9 582 aa13.21□□□□□ -0.29
CDC42BPB-205ENST00000559245 COL7A1Q02388 2944 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 MEGF11A6BM72 1044 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 TMEM210A6NLX4 147 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 CHST1O43916 411 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 FBXO24O75426 580 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 APOC1P02654 83 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 GABRA2P47869 451 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 ZNF121P58317 390 aaPredicted RBP13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 EMX1Q04741 257 aaPredicted RBP13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 PRDX4Q13162 271 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 CRMP1Q14194 572 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 EIF2B1Q14232 305 aaKnown RBP13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 SNCBQ16143 134 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 FTMTQ8N4E7 242 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 RNF148Q8N7C7 305 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 DTX3Q8N9I9 347 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 OR6K6Q8NGW6 343 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 MCUR1Q96AQ8 359 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 PHF21AQ96BD5 680 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 NKX3-1Q99801 234 aaPredicted RBP13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 OR10A2Q9H208 303 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 MMP28Q9H239 520 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 BRD7Q9NPI1 651 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 IL20Q9NYY1 176 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 NLKQ9UBE8 527 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 MPC1Q9Y5U8 109 aa13.2□□□□□ -0.3
CDC42BPB-205ENST00000559245 DSCAML1Q8TD84 2053 aa13.19□□□□□ -0.3
CDC42BPB-205ENST00000559245 OR2AT4A6NND4 320 aa13.19□□□□□ -0.3
CDC42BPB-205ENST00000559245 ZNF850A8MQ14 1090 aa13.19□□□□□ -0.3
CDC42BPB-205ENST00000559245 CCDC22O60826 627 aa13.19□□□□□ -0.3
CDC42BPB-205ENST00000559245 FABP3P05413 133 aa13.19□□□□□ -0.3
CDC42BPB-205ENST00000559245 CD28P10747 220 aa13.19□□□□□ -0.3
CDC42BPB-205ENST00000559245 CLUP10909 449 aa13.19□□□□□ -0.3
CDC42BPB-205ENST00000559245 SPI1P17947 270 aa13.19□□□□□ -0.3
CDC42BPB-205ENST00000559245 LIAT1Q6ZQX7 453 aa13.19□□□□□ -0.3
CDC42BPB-205ENST00000559245 KCTD8Q6ZWB6 473 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms