RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 MRGBPQ9NV56 204 aa14.42□□□□□ -0.1
TSPAN3-204ENST00000558394 MRPL22Q9NWU5 206 aaKnown RBP14.42□□□□□ -0.1
TSPAN3-204ENST00000558394 TCF19Q9Y242 345 aa14.42□□□□□ -0.1
TSPAN3-204ENST00000558394 ENPP4Q9Y6X5 453 aa14.42□□□□□ -0.1
TSPAN3-204ENST00000558394 ARPC3O15145 178 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 ANXA2P07355 339 aaKnown RBP14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 ACAA1P09110 424 aaPredicted RBP14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 ANOS1P23352 680 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 CAPZA1P52907 286 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 MAPRE2Q15555 327 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 SNCBQ16143 134 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 AGBL2Q5U5Z8 902 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 KCTD8Q6ZWB6 473 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 CBLL1Q75N03 491 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 DCXRQ7Z4W1 244 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 ZDHHC21Q8IVQ6 265 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 MKXQ8IYA7 352 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 TMEM185AQ8NFB2 350 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 PROKR2Q8NFJ6 384 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 ANGPTL6Q8NI99 470 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 PIFOQ8TCI5 191 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 RPS4Y2Q8TD47 263 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 SPSB4Q96A44 273 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 REEP6Q96HR9 211 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 GPR61Q9BZJ8 451 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 WNT10AQ9GZT5 417 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 TLNRD1Q9H1K6 362 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 SP140LQ9H930 580 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 AP3M1Q9Y2T2 418 aa14.41□□□□□ -0.1
TSPAN3-204ENST00000558394 OR6C68A6NDL8 312 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 AKR7A2O43488 359 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 TFF1P04155 84 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 CFL1P23528 166 aaKnown RBP14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 COX7A1P24310 79 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 KRTAP10-11P60412 298 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 FAM3AP98173 230 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 SPIBQ01892 262 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 TMEM219Q86XT9 240 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 CSNK2A3Q8NEV1 391 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 OR5AU1Q8NGC0 362 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 WIPF2Q8TF74 440 aaPredicted RBP14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 RPL3LQ92901 407 aaKnown RBP14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 SIKE1Q9BRV8 207 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 OR52D1Q9H346 318 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 NLKQ9UBE8 527 aa14.4□□□□□ -0.1
TSPAN3-204ENST00000558394 DNAH9Q9NYC9 4486 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 MEGF11A6BM72 1044 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 TVP23AA6NH52 213 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 TMEM210A6NLX4 147 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 OR2AT4A6NND4 320 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 VGLL3A8MV65 326 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 F2RL2O00254 374 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 CXCR6O00574 342 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 IDH3BO43837 385 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 SERPINA1P01009 418 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 SPARCP09486 303 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 GLRA1P23415 457 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 PYCR1P32322 319 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 SLC15A1P46059 708 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 RAB13P51153 203 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 KRT72Q14CN4 511 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 KLHL22Q53GT1 634 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 ZNRF1Q8ND25 227 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 SLAMF6Q96DU3 332 aa14.39□□□□□ -0.11
TSPAN3-204ENST00000558394 TCRBV4S1A1TA0A5B7 111 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 ZNF878C9JN71 531 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 H3BUI4 141 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 HSD11B1P28845 292 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 HOXD3P31249 432 aaPredicted RBP14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 CX3CR1P49238 355 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 GRB2P62993 217 aaKnown RBP14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 MXRA7P84157 204 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 CD83Q01151 205 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 GFOD2Q3B7J2 385 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 SLC35F1Q5T1Q4 408 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 CENPVQ7Z7K6 275 aaPredicted RBP14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 OR2T4Q8NH00 348 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 OR52J3Q8NH60 311 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 OR5K1Q8NHB7 308 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 FAM162AQ96A26 154 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 FOXRED1Q96CU9 486 aaPredicted RBP14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 ABCB9Q9NP78 766 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 RHBDD3Q9Y3P4 386 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 MPC1Q9Y5U8 109 aa14.38□□□□□ -0.11
TSPAN3-204ENST00000558394 TRBV4-1A0A0J9YWV2 114 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 A6NDX4 124 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 APOC1P02654 83 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 RHCEP18577 417 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 GSK3AP49840 483 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 ERVFRD-1P60508 538 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 SEC23BQ15437 767 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 CCDC121Q6ZUS5 278 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 ARPINQ7Z6K5 226 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 SGK3Q96BR1 496 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 MUC13Q9H3R2 512 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 PPP1R3EQ9H7J1 279 aa14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 INTS9Q9NV88 658 aaKnown RBP14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 TSSC4Q9Y5U2 329 aaPredicted RBP14.37□□□□□ -0.11
TSPAN3-204ENST00000558394 U3KQK5 164 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms